Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gallirallus_20okinawae_20[genbank_20GCA_5F002003005.1_202017-02-09]
768,680 sequences; 1,114,530,436 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq531629 136 2e-29
seq205660 98.7 4e-18
seq194331 84.2 9e-14
seq549345 80.6 1e-12
seq687285 77.0 1e-11
>seq531629
Length=79
Score = 136 bits (150), Expect = 2e-29
Identities = 77/78 (99%), Gaps = 0/78 (0%)
Strand=Plus/Minus
Query 605 GAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCA 664
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 78 GAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCA 19
Query 665 AATTTGGGTATAGGGGCG 682
||||||||||||||||||
Sbjct 18 AATTTGGGTATAGGGGCG 1
>seq205660
Length=1616
Score = 98.7 bits (108), Expect = 4e-18
Identities = 104/136 (76%), Gaps = 1/136 (1%)
Strand=Plus/Minus
Query 549 GAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGG-TGAACTATGCCTGAATAGGGTGAA 607
||||| |||| | || | ||||| |||||| | |||||| |||||| |||| ||
Sbjct 872 GAGTACGAGCGTCCATGCTCAGACCCAAAAGATAGCTGAACTGTGCCTGGGCAGGGCAAA 813
Query 608 GCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAAT 667
|||||||||||||||||||||| | | || ||| ||| | ||||||||| | ||| ||
Sbjct 812 ACCAGAGGAAACTCTGGTGGAGGTTTGTAGTGGTCCTGACATGCAAATCGGTTGTCCAAC 753
Query 668 TTGGGTATAGGGGCGA 683
|||| |||||||||
Sbjct 752 CCGGGTCTAGGGGCGA 737
>seq194331
Length=762
Score = 84.2 bits (92), Expect = 9e-14
Identities = 60/69 (87%), Gaps = 0/69 (0%)
Strand=Plus/Minus
Query 555 GAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAG 614
|||||| || | ||||| |||||||||||||||||||||| |||||||||||||||
Sbjct 69 GAGCATCCGTGCTAGGACCTGAAAGATGGTGAACTATGCCTGGGCAGGGTGAAGCCAGAG 10
Query 615 GAAACTCTG 623
|||||||||
Sbjct 9 GAAACTCTG 1
>seq549345
Length=225
Score = 80.6 bits (88), Expect = 1e-12
Identities = 70/87 (80%), Gaps = 0/87 (0%)
Strand=Plus/Minus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||||| |||| ||||||||||||| | || ||| |||||| | | ||||| |||||||
Sbjct 87 GAGTCGGGTTGCTTGGGAATGCAGCCCAAAGCGGGTGGTAAACTCCATCTAAGGCTAAAT 28
Query 100 ATTGGCCAGAGACCGATAGCGCACAAG 126
| ||| |||||||||||| |||||
Sbjct 27 ACCGGCACGAGACCGATAGCCAACAAG 1
>seq687285
Length=81
Score = 77.0 bits (84), Expect = 1e-11
Identities = 60/72 (83%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 612 GAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGG 671
||||||||||||||||||| || |||||| ||| ||||||||||| ||||| | ||
Sbjct 81 GAGGAAACTCTGGTGGAGGTCCGTAGCGGTCCTGACGTGCAAATCGGTCGTCCGACCCGG 22
Query 672 GTATAGGGGCGA 683
|| |||||||||
Sbjct 21 GTCTAGGGGCGA 10
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2063511814000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |