Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gallirallus_20okinawae_20[genbank_20GCA_5F002003005.1_202017-02-09]
768,680 sequences; 1,114,530,436 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq315876 181 2e-43
seq494975 87.8 3e-15
>seq315876
Length=216
Score = 181 bits (200), Expect = 2e-43
Identities = 171/217 (79%), Gaps = 1/217 (0%)
Strand=Plus/Minus
Query 106 AGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTAC 165
|| ||||| |||||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct 216 AGATTGAG-CAATAACAGGTCTGTGATGCCCTTAGATGTCCGGGGCCGCACGCGCGCTAC 158
Query 166 ACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACT 225
|||||| | || | || | | ||| ||||| ||| |||||| | | || |
Sbjct 157 ACTGACTGGCTCAGCTTGTGCCTACCCTCCGCCGGCAGGCGCGGGTAACCCGTTGAACCC 98
Query 226 CTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAG 285
| ||||| ||||||| | | ||||||||| || | | | |||||||||| || ||||||
Sbjct 97 CATTCGTGATGGGGATCGGGGATTGCAATTCTTCCCCGTGAACGAGGAATTCCCAGTAAG 38
Query 286 CGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCC 322
||| ||||| ||| ||||||||||| ||||||||||
Sbjct 37 CGCCGGTCATAAGCTCGCGTTGATTAAGTCCCTGCCC 1
>seq494975
Length=56
Score = 87.8 bits (96), Expect = 3e-15
Identities = 53/56 (95%), Gaps = 0/56 (0%)
Strand=Plus/Plus
Query 136 CTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCAC 191
|||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||
Sbjct 1 CTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGGGCCAGCGAGTACATCAC 56
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 939919063040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |