Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gallirallus_20okinawae_20[genbank_20GCA_5F002003005.1_202017-02-09] 768,680 sequences; 1,114,530,436 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq123270 86.0 3e-11 >seq123270 Length=350 Score = 86.0 bits (94), Expect = 3e-11 Identities = 98/132 (74%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 349084 CTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGCAAAGTGGAA 349143 ||||||||| | |||| |||||||| ||||||||||||| || || || ||||||| Sbjct 208 CTCCTTGAGGCGCGGCACCCCCAGGGTGACGTTCTTGGCCGACACCCCCGCGTAGTGGAA 149 Query 349144 GGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGAGGATGCCTAC 349203 ||| | ||||||| ||| ||| || || || | ||||| | || | || ||| || Sbjct 148 GGTGTTCAGGGTCATCTGGGTGGCCGGTTCCCCCAGCGACTGGGCGGCCAAGACGCCCAC 89 Query 349204 CATCTCGCCGGG 349215 |||||| || || Sbjct 88 CATCTCCCCTGG 77 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2064210371465840