Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gavia_20stellata_20[refseq_20GCF_5F000690875.1_202014-05-13] 61,831 sequences; 1,129,694,867 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq42363 122 1e-25 seq41306 118 2e-24 seq37431 114 2e-23 >seq42363 Length=26751 Score = 122 bits (134), Expect = 1e-25 Identities = 159/216 (74%), Gaps = 12/216 (6%) Strand=Plus/Minus Query 48 AAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCAT-TGGCTGGAAGCCAATAGTCCC 106 |||||||||||||||||||| |||| | | || ||| | |||| | |||| | ||||| Sbjct 803 AAGGGCATCACAGACCTGTTGTTGCTTTAT-CT--CATGTTGCTGAATGCCACTTGTCCC 747 Query 107 TCTAAGAAGCCAGCCACCAACCATAGTCG----ATGGGGCTATTTAGCAGGTTAAGGTCT 162 | |||||| | || |||||| | | ||| | | |||||| | | | || Sbjct 746 TTGAAGAAGTTGGACATCAACCACTGGGGGGTCATGTAACGAGTTAGCATGCCAGAGACT 687 Query 163 CGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCA 222 || ||||| |||| |||||||||||||||||||||||| ||| ||||| |||||| Sbjct 686 TGTCTGTTATTGGAAATAACCAGACAAATCACTCCACCAA----GAATGGCCAGGCACCA 631 Query 223 CCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||| ||| ||||| || | |||||||||| Sbjct 630 CCACCCATGTAATTGAGAAACAGTTCTCAATCTGTC 595 >seq41306 Length=19696 Score = 118 bits (130), Expect = 2e-24 Identities = 76/83 (92%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 |||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||| Sbjct 15476 GTCTCGTTCGTTATTGGAATTAACCAGACAAATCGCTCCACCAACTAAGAATGGCCATGA 15417 Query 219 ACCACCACCCATAGAATCAAGAA 241 ||||||||||| ||||| |||| Sbjct 15416 ACCACCACCCACCGAATCGAGAA 15394 >seq37431 Length=70259 Score = 114 bits (126), Expect = 2e-23 Identities = 71/76 (93%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 183 CAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAA 242 |||||||||| |||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct 70080 CAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCACGGAATCGAGAAA 70139 Query 243 GAGCTATCAATCTGTC 258 ||||| |||||||||| Sbjct 70140 GAGCTCTCAATCTGTC 70155 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796322726511