Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gavia_20stellata_20[refseq_20GCF_5F000690875.1_202014-05-13] 61,831 sequences; 1,129,694,867 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq8073 145 1e-32 seq43765 129 1e-27 seq30791 98.7 2e-18 >seq8073 Length=23397 Score = 145 bits (160), Expect = 1e-32 Identities = 192/263 (73%), Gaps = 9/263 (3%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 ||||||| |||||||||||||| ||||||||| | |||||||||| |||| |||| | Sbjct 2388 TCATCAGGAGGGTAAAACTAACTTGTCTCATGGCAGTCTAAACCCTGCTCGTGTTCGTTG 2329 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 ||| ||| ||||| | ||||| ||| ||||||| || | ||| ||||| |||||| Sbjct 2328 TTAATGGATGAACCAACCAACACTTGGTAAATTCTGTTT---TGTGACAGGAAAAGCCGA 2272 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 |||| |||| ||| ||| | ||| || |||| ||||||| || ||| || Sbjct 2271 CATCAAAGG--GCTGAAGTAACTTTGCT---AATACTTGACTGCCACGAGATGGTTTTCT 2217 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270 ||||||||||||||||| || || | || | ||| | || | | | | |||| || Sbjct 2216 CTGTGGTAACTTTTCTGACATCTTTTGCTTAAAACCTAGAAAGTC-AGAAGATCCTGAGA 2158 Query 271 CCACACTTTCATGGTTTGTATTC 293 ||||||| ||||| ||||||| Sbjct 2157 CCACACTAGCATGGCCTGTATTC 2135 >seq43765 Length=70494 Score = 129 bits (142), Expect = 1e-27 Identities = 85/93 (91%), Gaps = 1/93 (1%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 ||||||||||||||||||||||||||||||||| ||||| |||||| ||||| ||||||| Sbjct 10544 TCATCAGTAGGGTAAAACTAACCTGTCTCATGATGGTCT-AACCCAACTCACATTCCCTA 10602 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATT 123 ||||||||||||||||||| ||||| ||||| Sbjct 10603 TTAGTGGGTGAACAATCCAGCGCTTGGTGAATT 10635 >seq30791 Length=30658 Score = 98.7 bits (108), Expect = 2e-18 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 ||||||||||| |||||||||||||||| | || |||||||||||||||| |||||||| Sbjct 16792 TCATCAGTAGGCTAAAACTAACCTGTCTTACAACAGTCTAAACCCAGCTCATGTTCCCTA 16851 Query 91 TTAGTGGGTGAA 102 |||||||| ||| Sbjct 16852 TTAGTGGGGGAA 16863 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 853871715936