Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gavia_20stellata_20[refseq_20GCF_5F000690875.1_202014-05-13] 61,831 sequences; 1,129,694,867 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq18997 237 5e-60 seq50617 136 1e-29 seq31078 96.9 1e-17 seq14741 95.1 4e-17 >seq18997 Length=37763 Score = 237 bits (262), Expect = 5e-60 Identities = 170/196 (87%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 || ||| ||||||||||||||| | ||| |||||| | | ||||| |||| ||||| Sbjct 29480 CTTCCATTTATTCTACACCTCTTATGTCTGTTCACAGTGCCAAACTAGGGTCACACTCAA 29539 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 ||||||| | |||||| ||||||||| ||||||| |||||||||||||||||||| || | Sbjct 29540 CAGGGTCGTTTTTCCCTGCTGATTCCACCAAGCCTGTTCCCTTGGCTGTGGTTTCACTGG 29599 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 ||||||| |||||||||||||||||||||| |||||||||||||| |||||||| ||||| Sbjct 29600 ATAGTAGGTAGGGACAGTGGGAATCTCGTTCATCCATTCATGCGCATCACTAATCAGATG 29659 Query 417 ACGAGGCATTTGGCTA 432 || ||||||||||||| Sbjct 29660 ACAAGGCATTTGGCTA 29675 >seq50617 Length=172916 Score = 136 bits (150), Expect = 1e-29 Identities = 80/83 (96%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 361 TAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGA 420 ||| |||||||||||||||||||||| |||| |||||||||||||||||||||||||||| Sbjct 49058 TAGGTAGGGACAGTGGGAATCTCGTTCATCCGTTCATGCGCGTCACTAATTAGATGACGA 49117 Query 421 GGCATTTGGCTACCTTAAGAGAG 443 ||||||||||||||||||||||| Sbjct 49118 GGCATTTGGCTACCTTAAGAGAG 49140 >seq31078 Length=613 Score = 96.9 bits (106), Expect = 1e-17 Identities = 68/77 (88%), Gaps = 2/77 (3%) Strand=Plus/Plus Query 434 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTT 493 ||||||||||||| |||||||||| || |||||| |||| |||| |||||||||||| Sbjct 539 CTTAAGAGAGTCA--GTTACTCCCGACGGCTACCCGTGCTTCATTGAGTTTCTTCACTTT 596 Query 494 GACATTCAGAGCACTGG 510 ||||||||||||||||| Sbjct 597 GACATTCAGAGCACTGG 613 >seq14741 Length=59247 Score = 95.1 bits (104), Expect = 4e-17 Identities = 81/100 (81%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| | ||| || |||| |||| || |||| |||| | |||||||| |||||| ||| Sbjct 19788 CTTCTCCTCCACGGGAGGTTTCCGTCCTCCCTGAGCTCACCTTAGGAGACCTGCCTTACA 19847 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGA 106 |||| |||| ||| | |||||||||||||||||||||||| Sbjct 19848 GTTTGACAGGTGTACTGCCCCAGCCAAACTCCCCACCTGA 19887 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1634188939488