Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grus_20japonensis_20[genbank_20GCA_5F002002985.1_202017-02-10] 357,545 sequences; 1,265,634,512 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq44688 172 1e-40 seq105840 159 6e-37 seq287799 150 3e-34 >seq44688 Length=2873 Score = 172 bits (190), Expect = 1e-40 Identities = 207/276 (75%), Gaps = 4/276 (1%) Strand=Plus/Plus Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGA-CTTTTACTTTGAAAAAATTAGAGTGT 97 |||| ||| ||| |||| ||| || ||| | | | |||||||||| ||||||||||||| Sbjct 1019 ATGCTCTTAGCTGAGTGTCCCGCGGGGCCCGAAGCGTTTACTTTGAGAAAATTAGAGTGT 1078 Query 98 TCAAAGCAGGCCTTT-GCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTT 156 |||||||||||| || | |||| ||| |||||||| ||||||||| | ||||| Sbjct 1079 TCAAAGCAGGCCGGCCGCCGGCATACTGCAGCTAGGAATAATGGAATAGGAC-TCCGGTT 1137 Query 157 CTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGT 216 ||||||||||||||| | | || | |||||||| ||||| | |||||| | || Sbjct 1138 CTATTTTGTTGGTTTTCGGAAACGGGGCCATGATTAAGAGGGACGGCCGGGGGCATTCGT 1197 Query 217 ATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTT 276 ||| | |||||||||||||||||| ||||| ||| |||||||| || Sbjct 1198 ATTGTGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGGCCTAGAGCGAAAGCATT 1257 Query 277 CACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312 ||||| |||||||||||||||| |||||||||| Sbjct 1258 TGCCAAGAATGTTTTCATTAATCA-AGAACGAAAGT 1292 >seq105840 Length=647 Score = 159 bits (176), Expect = 6e-37 Identities = 205/275 (75%), Gaps = 6/275 (2%) Strand=Plus/Plus Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGA-CTTTTACTTTGAAAAAATTAGAGTGT 97 |||| ||| ||| |||| ||| || ||| | | | |||||||||| ||||||||||||| Sbjct 69 ATGCTCTTAGCTGAGTGTCCCGCGG-GCCCGAAGCGTTTACTTTGAGAAAATTAGAGTGT 127 Query 98 TCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTC 157 |||| |||||| || | |||| ||| |||||||| ||||||||| | |||||| Sbjct 128 TCAA-GCAGGCGGC-GCCGGCATACTGCAGCTAGGAATAATGGAATAGGAC-TCCGGTTC 184 Query 158 TATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTA 217 |||||||||||||| | | || | |||||||| ||||| | |||||| | ||| Sbjct 185 TATTTTGTTGGTTTTCGGAAACGGGGCCATGATTAAGAGGGACGGCCGGGGGCATTCGTA 244 Query 218 TTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTC 277 || | |||||||||||||||||| ||||| ||| |||||||| || Sbjct 245 TTGTGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGGCCTAGAGCGAAAGCATTT 304 Query 278 ACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312 ||||| |||||||||||||||| |||||||||| Sbjct 305 GCCAAGAATGTTTTCATTAATCA-AGAACGAAAGT 338 >seq287799 Length=689 Score = 150 bits (166), Expect = 3e-34 Identities = 188/250 (75%), Gaps = 12/250 (5%) Strand=Plus/Minus Query 74 TTTACTTTGAAAAAATTAGA-GTGTTCAAAGCAGGCCTTT-GCTCGAATACATTAGCATG 131 |||||||||| ||||||||| |||||||||||||||| || | |||| ||| | Sbjct 275 TTTACTTTGAGAAAATTAGAAGTGTTCAAAGCAGGCCGGCCGCCGGCATACTGCAGCTAG 216 Query 132 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATT 191 ||||||| ||||||||| | |||||||||||||||||||| | | || | |||||| Sbjct 215 GAATAATGGAATAGGAC-TCCGGTTCTATTTTGTTGGTTTTCGGAAACGGGGCCATGATT 157 Query 192 AATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTC----AGAGGTGAAATTCTTGGATT 247 || ||||| | |||||| | ||||| || | |||||||||||||||||| Sbjct 156 AAGAGGGACGGCCGGGGGCATTCGTATT---GTGCCGCGTAGAGGTGAAATTCTTGGACC 100 Query 248 TATTGAAGAC-TAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAAC 306 ||||| | ||| |||||||| || ||||| |||||||||||||||| |||| Sbjct 99 GGCGCAAGACGGACCTAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCA-AGAAC 41 Query 307 GAAAGTTAGG 316 ||||||| || Sbjct 40 GAAAGTTCGG 31 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 911927748160