Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grus_20japonensis_20[genbank_20GCA_5F002002985.1_202017-02-10] 357,545 sequences; 1,265,634,512 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value seq291283 107 2e-21 >seq291283 Length=521 Score = 107 bits (118), Expect = 2e-21 Identities = 128/168 (76%), Gaps = 8/168 (5%) Strand=Plus/Plus Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGT-TAAG 83 |||| |||||| ||||| || | || |||| |||| || ||| || | | | |||| Sbjct 341 AAACCGACACAGGTAGTTGG-TAGAGAATACCAAGGGGCGCGAGATAA-CTCTCTCTAAG 398 Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCA--GAAATG--- 138 ||||| |||||| || ||| |||||||||||| || |||| ||| || | || ||| Sbjct 399 GAACTCGGCAAAATGGCCCCGTAACTTCGGGAGAAGGGGTACCTCCCAAGTGATATGCTT 458 Query 139 GGAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGG 186 ||||| ||||| || ||| |||||| |||||||| |||||||||||| Sbjct 459 GGAGGTCGCAGTGACCAGGCCCAGGCGACTGTTTATCAAAAACACAGG 506 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 529360073430