Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grus_20japonensis_20[genbank_20GCA_5F002002985.1_202017-02-10] 357,545 sequences; 1,265,634,512 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq288304 141 2e-31 seq291283 87.8 5e-15 >seq288304 Length=240 Score = 141 bits (156), Expect = 2e-31 Identities = 104/121 (86%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 |||||||||||| | || ||||||| ||||||| ||||||| ||| |||||| Sbjct 150 GCATCTTCACAGACAAGTCTATTTCACCGAGTCTCTCTCCGAGACAGTGCCCAGATCGTT 91 Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 90 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 31 Query 133 T 133 | Sbjct 30 T 30 >seq291283 Length=521 Score = 87.8 bits (96), Expect = 5e-15 Identities = 117/163 (72%), Gaps = 16/163 (10%) Strand=Plus/Minus Query 257 CTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATGAGCTTACGGA 316 |||||||||| |||||||||||| |||||||| || ||||| || ||| || Sbjct 505 CTGTGTTTTTGATAAACAGTCGCCTGGGCCTGGTCACTGCGACCTCCA--AGCATA---- 452 Query 317 GCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCTTTTTGCCTAG 376 |||| | || | ||||||||||||||||||| ||| ||||||| || Sbjct 451 ---------TCACT-TGGGAGGTACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAG 402 Query 377 TTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACC 419 |||||| ||||| |||| || ||||||||||||||||| Sbjct 401 TTCCTTAGAGAGAGTTATCTCGCGCCCCTTGGTATTCTCTACC 359 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1256292072640