Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grus_20japonensis_20[genbank_20GCA_5F002002985.1_202017-02-10] 357,545 sequences; 1,265,634,512 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq288304 159 7e-37 seq291283 104 5e-20 >seq288304 Length=240 Score = 159 bits (176), Expect = 7e-37 Identities = 108/121 (89%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| | | | |||||||||||||| | ||||||||||||| |||||| Sbjct 150 GCATCTTCACAGACAAGTCTATTTCACCGAGTCTCTCTCCGAGACAGTGCCCAGATCGTT 91 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 90 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 31 Query 127 T 127 | Sbjct 30 T 30 >seq291283 Length=521 Score = 104 bits (114), Expect = 5e-20 Identities = 92/113 (81%), Gaps = 9/113 (8%) Strand=Plus/Minus Query 249 ACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGT---CATAG-AC 304 ||||||||||||| ||||||||||| ||||||| || ||||| ||| |||| || Sbjct 507 ACCTGTGTTTTTGATAAACAGTCGCCTGGGCCTGGTCACTGCGACCTCCAAGCATATCAC 448 Query 305 -----AGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352 ||| |||||||||||| ||||||||||| ||||||||||||||||||| Sbjct 447 TTGGGAGGTACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAGTTCCTTA 395 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1058601441920