Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grus_20japonensis_20[genbank_20GCA_5F002002985.1_202017-02-10] 357,545 sequences; 1,265,634,512 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq21057 102 2e-19 >seq21057 Length=1032 Score = 102 bits (112), Expect = 2e-19 Identities = 153/227 (67%), Gaps = 44/227 (19%) Strand=Plus/Plus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 ||||| |||||| || |||||||||||||| |||||| || | | |||||||||||| Sbjct 783 TACGATCGCAAGATTCAAACTCAAAGGAATAGACGGGAGCCTATATATGCGGTGGAGCAT 842 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 |||||||||||||| |||||| | ||||||||| | ||||| ||| Sbjct 843 GTGGTTTAATTCGACAAAACGCGCAAAACCTTACCCATCCTTGA-ATC------------ 889 Query 121 TAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAG 180 ||||| |||| | ||||||| ||||||||| Sbjct 890 -----ATAGA--------------------------CAGGAGTTGCATGGCTGTCGTCAG 918 Query 181 CTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCT 227 ||||||||||||| | | |||||||||| ||||| ||||||||| Sbjct 919 TTCGTGTCGTGAGACGGTCGGTTAAGTCCTTTAACGAACGCAACCCT 965 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1498622523200