Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grus_20japonensis_20[genbank_20GCA_5F002002985.1_202017-02-10] 357,545 sequences; 1,265,634,512 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq44688 255 9e-66 seq92752 82.4 1e-13 seq105840 78.8 1e-12 >seq44688 Length=2873 Score = 255 bits (282), Expect = 9e-66 Identities = 208/248 (84%), Gaps = 6/248 (2%) Strand=Plus/Minus Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74 |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| | Sbjct 1789 GTCAGTGTAGCGCGCGTGCGGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC-T 1731 Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCA-TAGT 133 ||| || | |||||| | |||| | |||||||||||||| | | || ||| | | Sbjct 1730 CAATCT-CGGGTGGCTGAACGCCACTTGTCCCTCTAAGAAGTTGGACGCCGACCGCTCGG 1672 Query 134 CGATGGGG---CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAA 190 | | | | ||| |||||| | | |||||||||||||||||||||||||||||||| Sbjct 1671 GGGTCGCGTAACTAGTTAGCATGCCAGAGTCTCGTTCGTTATCGGAATTAACCAGACAAA 1612 Query 191 TCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATC 250 || |||||||||||||||||||||||||||||||||||| ||||| |||||||||| || Sbjct 1611 TCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCACGGAATCGAGAAAGAGCTCTC 1552 Query 251 AATCTGTC 258 |||||||| Sbjct 1551 AATCTGTC 1544 >seq92752 Length=6665 Score = 82.4 bits (90), Expect = 1e-13 Identities = 88/114 (77%), Gaps = 8/114 (7%) Strand=Plus/Minus Query 146 TTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTA 205 |||||| | | |||| ||| ||||| |||||||||||| ||||||||||||| Sbjct 6493 TTAGCATGCTGGAGTCTTGTTTGTTATTGGAATTAACCAG--AAATCACTCCACC----G 6440 Query 206 AGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTCC 259 ||| ||||| |||||||||| ||| |||| ||||||||| || ||||||| Sbjct 6439 TGAATGGCCAGGCACCACCACACATGGAATTGAGAAAGAGC--TCTGTCTGTCC 6388 >seq105840 Length=647 Score = 78.8 bits (86), Expect = 1e-12 Identities = 49/53 (92%), Gaps = 0/53 (0%) Strand=Plus/Minus Query 206 AGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||||||||||||||| ||||| |||||||||| |||||||||| Sbjct 647 AGAACGGCCATGCACCACCACCCACGGAATCGAGAAAGAGCTCTCAATCTGTC 595 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 794040110145