Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grus_20japonensis_20[genbank_20GCA_5F002002985.1_202017-02-10] 357,545 sequences; 1,265,634,512 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq44688 95.1 1e-17 seq105840 86.0 7e-15 seq287799 84.2 3e-14 >seq44688 Length=2873 Score = 95.1 bits (104), Expect = 1e-17 Identities = 143/193 (74%), Gaps = 8/193 (4%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| || | ||||||||| |||||||| ||| |||| | |||| Sbjct 1152 AAACCAACAAAATAGAACCGGA-GTCCTATTCCATTATTCCTAGCTGCAGTATGCCGGCG 1094 Query 70 TAAG-CCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG-TCCTGGTTCCTCCGCACA 127 | |||||||||||||||||||||||||||| ||||| | | | || || | | ||| Sbjct 1093 GCCGGCCTGCTTTGAACACTCTAATTTTCTCAAAGTAAACGCTTCGGGCCCCGCGGGACA 1034 Query 128 C-CAATGAAG-GCAT-ACGGGCTCACCAAGAGGTA-GGGCTGGGTAATGCAGT-ACTCGC 182 | || ||| |||| ||| | || ||||| | |||||||| | || || ||||| Sbjct 1033 CTCAGCTAAGAGCATCGAGGGGGCGCCGAGAGGCAGGGGCTGGGACAGGCGGTGGCTCGC 974 Query 183 CGTGAGGCGGACC 195 | | |||||||| Sbjct 973 CTCGCGGCGGACC 961 >seq105840 Length=647 Score = 86.0 bits (94), Expect = 7e-15 Identities = 80/98 (82%), Gaps = 3/98 (3%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| || | ||||||||| |||||||| ||| |||| | |||| Sbjct 198 AAACCAACAAAATAGAACCGGA-GTCCTATTCCATTATTCCTAGCTGCAGTATGCCGGCG 140 Query 70 TAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 |||||||| |||||||||||||||||||| ||||| Sbjct 139 CC-GCCTGCTT-GAACACTCTAATTTTCTCAAAGTAAA 104 >seq287799 Length=689 Score = 84.2 bits (92), Expect = 3e-14 Identities = 81/100 (81%), Gaps = 3/100 (3%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| || | ||||||||| |||||||| ||| |||| | |||| Sbjct 177 AAACCAACAAAATAGAACCGGA-GTCCTATTCCATTATTCCTAGCTGCAGTATGCCGGCG 235 Query 70 TAAG-CCTGCTTTGAACACT-CTAATTTTCTCAAGGTAAA 107 | ||||||||||||||| ||||||||||||| ||||| Sbjct 236 GCCGGCCTGCTTTGAACACTTCTAATTTTCTCAAAGTAAA 275 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593138395530