Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grus_20japonensis_20[genbank_20GCA_5F002002985.1_202017-02-10] 357,545 sequences; 1,265,634,512 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq177583 192 1e-46 seq288065 89.7 1e-15 >seq177583 Length=579 Score = 192 bits (212), Expect = 1e-46 Identities = 140/160 (88%), Gaps = 2/160 (1%) Strand=Plus/Minus Query 240 CATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAGGATGGCTG 299 |||| ||||||| || | ||||||||||||||||||||||||||||| ||||||||||| Sbjct 564 CATTTTCGGCGCAAAAGCGCTTGACCAGTGAGCTATTACGCACTCTTTAAAGGATGGCTG 505 Query 300 CTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTC-CACATCCTTTCCCACTGAGTCACC 358 |||| | || |||||||||||||||| ||| ||| ||| |||||||||||| || || Sbjct 504 CTTCTAGGCAAACCTCCTGGTTGTCTCTGCA-CTCTCACCTCCTTTCCCACTTAGCGGCC 446 Query 359 ACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCT 398 | |||||||||||||||| ||||||||||||||||||||| Sbjct 445 ATTTAGGGGCCTTAGCTGGTGATCTGGGCTGTTTCCCTCT 406 >seq288065 Length=880 Score = 89.7 bits (98), Expect = 1e-15 Identities = 102/136 (75%), Gaps = 1/136 (1%) Strand=Plus/Plus Query 266 AGTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCT 325 |||||||| |||||| ||||| ||||||| ||| ||| ||||| ||||||| ||| Sbjct 540 AGTGAGCTGTTACGCTTTCTTTAAAGGATGACTGATTCTAAGCCCACCTCCTAACGATCT 599 Query 326 ACGCAACTCCACATCCTTTCCCACTGAGTCA-CCACTTAGGGGCCTTAGCTGATGATCTG 384 |||| || ||||||||||||| | || | || | | |||| ||| | |||| Sbjct 600 TCGCAGTCTCATATCCTTTCCCACTCAAACATACGGTTCGAGATCTTACCTGTCGTTCTG 659 Query 385 GGCTGTTTCCCTCTCG 400 |||||||||||||||| Sbjct 660 GGCTGTTTCCCTCTCG 675 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1173389550080