Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grus_20japonensis_20[genbank_20GCA_5F002002985.1_202017-02-10] 357,545 sequences; 1,265,634,512 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq291703 262 6e-68 >seq291703 Length=417 Score = 262 bits (290), Expect = 6e-68 Identities = 224/275 (81%), Gaps = 1/275 (0%) Strand=Plus/Plus Query 2 GAGGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAG 61 |||| ||||||| ||||||||| |||||| |||||| ||| |||| ||| ||||| Sbjct 3 GAGGTGGGCTTCCTACTTAGATGCTTTCAGCAGTTATCCGCTCCGCACTTGGCTACCCAG 62 Query 62 CTATGCACTTGGCAGT-ACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTA 120 | | | ||||| | ||||||| |||||| ||| |||| |||||||||||||||| Sbjct 63 CGTTTACCGTGGCAACGATAACTGGTACACCAGCGGTGCGTCCTTCCCGGTCCTCTCGTA 122 Query 121 CTAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCG 180 ||| ||| || ||||||||| || |||| || |||||| ||||||||||||||| Sbjct 123 CTAGGGAAAGATCCTCTCAAGACTCTAGCGCCTACACCGGATATGGACCGAACTGTCTCA 182 Query 181 CGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGAC 240 |||||||||||||||||||| ||| || |||| ||||||||||||||||||||||||||| Sbjct 183 CGACGTTCTGAACCCAGCTCACGTACCGCTTTCATGGGCGAACAGCCCAACCCTTGGGAC 242 Query 241 CTACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 |||||| |||||||| || || |||||||||||| Sbjct 243 GTACTTCCGCCCCAGGTTGCGATGAGCCGACATCG 277 Score = 75.2 bits (82), Expect = 2e-11 Identities = 67/84 (80%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 80 AACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCTCTCA 139 ||||||| |||||| ||| |||| ||||||||||||||||||| ||| || |||||||| Sbjct 410 AACTGGTACACCAGCGGTGCGTCCTTCCCGGTCCTCTCGTACTAGGGAAAGATCCTCTCA 351 Query 140 AATTTCCTACGCCCACGACGGATA 163 | || |||| || |||||| Sbjct 350 AGACTCTAGCGCCTACACCGGATA 327 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 778095529620