Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grus_20japonensis_20[genbank_20GCA_5F002002985.1_202017-02-10] 357,545 sequences; 1,265,634,512 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq21057 138 3e-30 >seq21057 Length=1032 Score = 138 bits (152), Expect = 3e-30 Identities = 234/327 (72%), Gaps = 9/327 (3%) Strand=Plus/Plus Query 170 TAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGAGAGGGT 229 ||| ||||||| |||| ||||| ||||| ||| |||| |||| | |||||||| Sbjct 173 TAGGTAGTTGGGGAGGTTGCGGCTCCCCAAGCCGATGATCCTTAGCTGGTCTGAGAGGAC 232 Query 230 GATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGGGGAA 289 | | |||||| ||| | ||||| |||| ||| |||| ||||||||||||||||| Sbjct 233 GTACAGCCACACTGGGATTGAGA-ACGGCCCAGACTCGATTTAGAGGCAGCAGTGGGGAA 291 Query 290 TATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCG-ATGAAGG-CCTTC 347 | ||| |||||| | | || |||| ||||||| | |||||| | | || || | | | Sbjct 292 TTTTGGACAATGTACGAGAGTATGATCCAGCAACACAACGTGAGAGTACGACGGTCATAC 351 Query 348 GGGTC-GTAAAGCTCTGTCCTC-AAGGAAGATAATGACGGTACTT-GAGGAGGAAGCCCC 404 || | | | ||||||| || ||| | | |||| ||| || ||||||||| Sbjct 352 TGGACTGAACCTCTCTGTCGTCGAAGTCAAAGTATGATATAGCTTCGAATAGGAAGCCCT 411 Query 405 GGCTAAC-TACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTA-GCGTTATCCGGAATT 462 ||||||| | ||||||||||||||||||| || |||||| | | || || | | Sbjct 412 GGCTAACATCTGTGCCAGCAGCCGCGGTAAAACAGGGGGGGCAAGGTGTCATTCATCTTA 471 Query 463 ACTGGGGCGTAAAGGGTGCGTAGGTGG 489 ||| |||||||||||||| ||||| || Sbjct 472 ACT-GGGCGTAAAGGGTGAGTAGGCGG 497 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1492245406080