Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grus_20japonensis_20[genbank_20GCA_5F002002985.1_202017-02-10] 357,545 sequences; 1,265,634,512 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq21057 114 3e-23 >seq21057 Length=1032 Score = 114 bits (126), Expect = 3e-23 Identities = 234/343 (68%), Gaps = 26/343 (8%) Strand=Plus/Plus Query 10 AGGAAGCCCCGGCTAACTAC-GTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGC-GTT 67 ||||||||| ||||||| | ||||||||||||||||||| || |||||| || || Sbjct 402 AGGAAGCCCTGGCTAACATCTGTGCCAGCAGCCGCGGTAAAACAGGGGGGGCAAGGTGTC 461 Query 68 ATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGC 127 || | | ||||||||||||||||| ||||| || || ||||||| Sbjct 462 ATTCATCTTAACTGGGCGTAAAGGGTGAGTAGGCGG----------CATGCGTGAAAGCA 511 Query 128 TATGGCTCAACCC---CG----GGAC----TGCTTTTGA--AACTGCAGGGCTAGAGTGC 174 | || |||| || || ||| | | ||| ||| | || ||| ||| || Sbjct 512 TTTGT-TCAAGCCTTCCGAAGTGGAAGATGTCAATGTGAGTAACGGAAGTGCTTGAGAGC 570 Query 175 AGGAGGGGCAAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACAC 234 | | ||| |||||| | | ||| || ||| | ||| ||| | ||||| | Sbjct 571 AATGAGAAAAAGCGGAATTTCCAAAGTAATGGGTCAATATGAAGAAATTGGAAGGAAGGC 630 Query 235 CAGTGGCGAAGGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGC 294 | | ||||||||| |||| | || | ||||| ||||||| |||||||||||| ||| Sbjct 631 CGGAGGCGAAGGCAGCTTTTTTTGTTGGATCTGACGCTGAGGCACGAAAGCGTGGGTAGC 690 Query 295 AAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGA 337 | | ||||||| |||| |||||||||||| |||||||||| Sbjct 691 GATCGGGATTAGGGACCCCAGTAGTCCACGCCCTAAACGATGA 733 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1198898018560