Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grus_20japonensis_20[genbank_20GCA_5F002002985.1_202017-02-10] 357,545 sequences; 1,265,634,512 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq177583 194 6e-47 seq127600 114 4e-23 >seq177583 Length=579 Score = 194 bits (214), Expect = 6e-47 Identities = 322/455 (71%), Gaps = 15/455 (3%) Strand=Plus/Plus Query 34 AGACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGA 93 ||||||||| || |||||||| ||||||||||||||||| | ||||| || |||| Sbjct 98 AGACCCGAACCCGGGTGATCTAACCATGGCCAGGATGAAGCTAGGGTAATACCTTGTGGA 157 Query 94 GGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCT 153 |||||||||| || |||||||||||| | ||||||| ||||| ||||||||||| || Sbjct 158 GGTCCGAACCGACCGATGTTGAAAAATCGGCGGATGAGTTGTGGTTAGGGGTGAAATGCC 217 Query 154 AAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGCCTCAAGTATC 213 || | |||| ||| |||||||||||| |||||| || ||| | | || || Sbjct 218 AATCGAACTCGGAGCTAGCTGGTTCTCCCCGAAATGCGTTGAGG-CGCAGCGGTAGATTC 276 Query 214 ---ACCATC-GGGGGTAGAGCACTGTTATGGCTAGGGGGTCATTGCGACTTACCAAACCA 269 | || |||||| ||||||| | | | || ||| | | | ||||||| | Sbjct 277 GGGGCTGTCTAGGGGTAAAGCACTG-TCTCGGTACGGGCTGCGAGAGCGGTACCAAATCG 335 Query 270 TTGCAAACTCCGAATGC---GCAT-CAGTTTTACCGCGGGAGTGAGGGCATGGGTGCTAA 325 | |||||||| |||| | ||| | || | || |||||| |||| | ||| Sbjct 336 TAGCAAACTCTGAATACTAGACATGCCGTCCATCTGC--CAGTGAGACGGTGGGGGATAA 393 Query 326 GGTCCGTGCCCGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTA 385 | | | | | ||||| || | || || | ||||||||||||| ||||| | |||| Sbjct 394 GCTTCATCGTCAAGAGGGAAACAGCCCAGATCACCAGCTAAGGCCCCTAAATGGCCGCTA 453 Query 386 AGTTAAACTAACGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCAT 445 ||| | || || || || ||| ||||| | |||| ||| || | |||||||||| Sbjct 454 AGTGGGA--AAGGAGGTGAGAGTGCAGAGACAACCAGGAGGTTTGCCTAGAAGCAGCCA- 510 Query 446 TCATTTAAAGAGTGCGTAACAGCTCACTAGTCGAG 480 || |||||||||||||||| |||||||| ||| || Sbjct 511 TCCTTTAAAGAGTGCGTAATAGCTCACTGGTCAAG 545 >seq127600 Length=739 Score = 114 bits (126), Expect = 4e-23 Identities = 128/171 (75%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 35 GACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAG 94 |||||||||| |||||||||| | || ||||| ||||| | | |||| | || || Sbjct 196 GACCCGAAACTAAGTGATCTATTCGTGTCCAGGCTGAAGATTTGATAACTCAATTTGAAG 137 Query 95 GTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTA 154 | ||| ||| |||| | ||||| ||||||| || | |||| ||||||||||| Sbjct 136 GGCCGCACCTGTGTATGTAGCAAAATACTAGGATGAGGTGCGAATAGGAGTGAAAGGCTA 77 Query 155 AACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGCCT 205 | ||||||| || ||||||||||||| ||||| |||||||||| |||| Sbjct 76 ATCAAACTTAGAGATAGCTGGTTCTCCGCGAAATATATTTAGGTATAGCCT 26 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1683558919680