Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grus_20japonensis_20[genbank_20GCA_5F002002985.1_202017-02-10] 357,545 sequences; 1,265,634,512 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq59126 497 3e-138 seq58984 187 8e-45 seq319907 102 3e-19 seq25537 102 3e-19 seq182038 98.7 3e-18 seq195494 89.7 2e-15 >seq59126 Length=1936 Score = 497 bits (550), Expect = 3e-138 Identities = 455/584 (78%), Gaps = 58/584 (10%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| | |||| |||| || |||| |||| | ||||||||||||||||||| | Sbjct 757 CTTCTGCTCCGCGGGAGGTTTCCGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACG 698 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||| |||| ||| ||||||||| ||||||||||||||| | |||| | ||| || Sbjct 697 CTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGCCGCTGTCCCCGGAGCGGGTC 638 Query 127 G------GCCCGCGAAGGAC-CTTAACGCCAGAAAATGG--------TCGGTGAAGACCA 171 | || |||| || | ||| |||||||| | |||| | || Sbjct 637 GCGCCCGGCACGCGCCGGGCGCTTGGCGCCAGAAGCGAGAGCCCCCCTCGGGGCTCGCCC 578 Query 172 GTTCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCAC--------- 222 |||| ||| | ||||| |||||||||| || ||||||||||||||| Sbjct 577 CC-CCGCCTCACCGGGTAAGTGAAAAAACGATCAGAGTAGTGGTATTTCACCGACGGCCG 519 Query 223 -----------------TTGCGCCGAAACGGC----------------TCCCACTTATTC 249 | || ||| | || | |||||||||||| Sbjct 518 GGACGCCGGCGGGCGGGTCGCCCCGCACCGCCGAGCGCGCGCCCGGCCTCCCACTTATTC 459 Query 250 TACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTT 309 ||||||||||| ||| |||||| | | ||||||||||||||||||||||||||||||| Sbjct 458 TACACCTCTCATGTCTCTTCACAGCGCCAGACTAGAGTCAAGCTCAACAGGGTCTTCTTT 399 Query 310 CCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG 369 ||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct 398 CCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGGTAGGG 339 Query 370 ACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGG 429 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 338 ACAGTGGGAATCTCGTTCATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGG 279 Query 430 CTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCA 489 ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 278 CTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTCATTGAATTTCTTCA 219 Query 490 CTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||||||||||||||||||||||||||||| ||||||||| Sbjct 218 CTTTGACATTCAGAGCACTGGGCAGAAATCACATCGCGTCAACA 175 >seq58984 Length=22470 Score = 187 bits (206), Expect = 8e-45 Identities = 159/195 (82%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 238 TCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAAC 297 ||||| ||||||||||||||| | ||| |||||| | |||||||||| | ||||| Sbjct 21711 TCCCATTTATTCTACACCTCTGATGTCTCTTCACAGCACCACACTAGAGTCATGTTCAAC 21770 Query 298 AGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 357 |||||| || || || |||||| || ||||||| |||| ||||||||||||||| || | Sbjct 21771 AGGGTCGTCCTTTCCTGCTGATCCCCCCAAGCCTGTTCTCTTGGCTGTGGTTTCACTGGG 21830 Query 358 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATG--CGCGTCACTAATTAGAT 415 ||||| ||||||||| ||||||||| || |||||||||| | | ||||||||| ||| Sbjct 21831 TAGTAAGTAGGGACAGAGGGAATCTCATTCCTCCATTCATGCACACATCACTAATTGGAT 21890 Query 416 GACGAGGCATTTGGC 430 || |||||||||||| Sbjct 21891 GATGAGGCATTTGGC 21905 >seq319907 Length=389 Score = 102 bits (112), Expect = 3e-19 Identities = 97/124 (78%), Gaps = 5/124 (4%) Strand=Plus/Plus Query 11 TGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGGTTT 70 ||||| | |||| |||| || |||| |||| | ||||||||||||||||||| | ||| Sbjct 2 TGCTCCGCGGGAGGTTTCCGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACGCTTT 61 Query 71 AACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATCGGCC 130 |||| ||| ||||||||| ||||||||||||||| | |||| |||||| ||| Sbjct 62 GACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGCCGCTGTC-----CCCGGAGCGGGT 116 Query 131 CGCG 134 |||| Sbjct 117 CGCG 120 >seq25537 Length=41488 Score = 102 bits (112), Expect = 3e-19 Identities = 83/101 (82%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| | ||| | |||| |||| |||||| |||| | |||||||| || ||||||| | Sbjct 4599 CTTCTCCTCCATGGGAGGTTTCCATTCTCCCTGAGCTCACCTTAGGAGACGTGCGTTACG 4658 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGAC 107 |||| |||| ||| ||||||||||||||||||||||||||| Sbjct 4659 GTTTGACAGGTGTACCGCCCCAGCCAAACTCCCCACCTGAC 4699 >seq182038 Length=539 Score = 98.7 bits (108), Expect = 3e-18 Identities = 86/107 (80%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| | |||| |||| || |||| |||| | ||||||||||||||||||| | Sbjct 102 CTTCTGCTCCGCGGGAGGTTTCCGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACG 161 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 ||| |||| ||| ||||||||| ||||| ||||||||| | |||| Sbjct 162 CTTTGACAGGTGTACCGCCCCAGTCAAACCCCCCACCTGCCGCTGTC 208 >seq195494 Length=1402 Score = 89.7 bits (98), Expect = 2e-15 Identities = 76/94 (81%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 20 GGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGGTTTAACAGATGT 79 |||| ||||||| |||| |||| | ||||||||||||||||||||| ||| |||| | | Sbjct 1401 GGAGGTTTCTGTCCTCCCTGAGCCTGCCTTAGGACACCTGCGTTATGCTTTGACAGGTAT 1342 Query 80 GCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 | | ||||| |||||||||||| || | |||| Sbjct 1341 ACTGTCCCAGTCAAACTCCCCACTTGCCGTTGTC 1308 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1629353424160