Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grus_20japonensis_20[genbank_20GCA_5F002002985.1_202017-02-10] 357,545 sequences; 1,265,634,512 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq44688 457 3e-126 seq259756 293 7e-77 seq287799 179 1e-42 seq218695 138 3e-30 seq262084 116 1e-23 >seq44688 Length=2873 Score = 457 bits (506), Expect = 3e-126 Identities = 415/515 (81%), Gaps = 16/515 (3%) Strand=Plus/Minus Query 4 CTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCC 62 ||||||||||||||| | || | |||||| ||||||| ||||| | |||||||||||| Sbjct 822 CTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACTACCTCC 763 Query 63 CCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTC 122 ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 762 CCGGGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTC 703 Query 123 TCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGG 182 |||||||||||||||||||||||||||| ||||||||| |||||| | ||||||||||| Sbjct 702 TCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTCACCCGTGGTCACCATGGTAGG 643 Query 183 CCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCA 242 | | ||||||||||||||||||||||||| ||| ||||| | |||||| | | Sbjct 642 CACAGACAGTACCATCGAAAGTTGATAGGGCAGACATTCGAATGGGTCGTCGCCGCCGCG 583 Query 243 AGGCCATGCGATTCGTT--AAGTTATTATGAATCACCAAGGAGCCCCGAAGGGC----GT 296 || | |||||| | | | ||||| || ||||||| | || | |||| || Sbjct 582 GGGGCGTGCGATCGGCTCGAGGTTATCTAGAGTCACCAAAGCTGCCGGGCGGGCCCGGGT 523 Query 297 TGGTTTTTTATCTAATAAATACACCCCTTCC--GAAGTCGG-GGTTTTTAGCATGTATTA 353 ||| |||| ||| |||||| ||| | | || || ||||| | | | |||||||||| Sbjct 522 TGG-TTTTGGTCTGATAAATGCACGCGTCCCCGGAGGTCGGCGCTCGTCGGCATGTATTA 464 Query 354 GCTCTAGAATTACCACGGTTATCCATGTA----GTAAGGTACTATCAAATAAACGATAAC 409 |||||||||||||||| |||||||| | | | ||| | | |||| ||| ||||| Sbjct 463 GCTCTAGAATTACCACAGTTATCCAAGGAGCGGGAGAGGAGCGACCAAAGGAACCATAAC 404 Query 410 TGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGG 469 |||||||||||||||||||||||||||||||| | | | ||||||||||||||||| Sbjct 403 TGATTTAATGAGCCATTCGCAGTTTCACTGTACCGCCCGTGTGTACTTAGACATGCATGG 344 Query 470 CTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||| |||||||||||||||||| |||||||||| Sbjct 343 CTTAAGCTTTGAGACAAGCATATG-CTACTGGCAG 310 >seq259756 Length=440 Score = 293 bits (324), Expect = 7e-77 Identities = 350/453 (77%), Gaps = 28/453 (6%) Strand=Plus/Minus Query 54 ACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGT 113 |||||||||| | ||||||| ||| ||||| ||||||||||||||| ||||||||||||| Sbjct 440 ACTACCTCCCGG-GTCGGGAGTGG-TAATT-GCGCGCCTGCTGCCT-CCTTGGATGTGGT 385 Query 114 AGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATAC 173 ||||||| |||||||||| |||||||| ||||||| | || ||| | |||| | || Sbjct 384 AGCCGTT-CTCAGGCTCC-TCTCCGGA-TCGAACC-TGAT---CCGGTCACCGTGGTCAC 332 Query 174 CATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATC 233 |||||||| || | |||||||||| |||||||||||||| ||| ||||| | || Sbjct 331 CATGGTAGCACAG-ACAGTACCATCGAA-GTTGATAGGGCAGACATTCGAATGGTCG-TC 275 Query 234 GCCGGCTCAAGGCCATGCGATTCGTT--AAGTTATTATGAATCACCAAGGAGCCCCGAAG 291 |||| | | ||| |||||| | | | ||||| || ||||||| | || | | Sbjct 274 GCCGCCGCGGGGCG-TGCGATCGGCTCGAGGTTATCTAGAGTCACCAAAGCTGCCGGGCG 216 Query 292 GGCGTTGGTT--TTTTATCTAATAAAT-ACACCCCTTCC---GAAGTCGGGGTTTTTAG- 344 ||| |||| |||| ||| |||||| |||| | | || || ||||| | | | | Sbjct 215 GGCCCGGGTTGGTTTTGTCTGATAAATGACACGCGTCCCCGGGAGGTCGGCGCTCGTCGG 156 Query 345 CATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTA----AGGTACTATCAAATA 400 ||||||||||||||||||||||||| |||||||| | || ||| | | |||| Sbjct 155 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGGAGCGGGAGAGGAGCGACCAAAGG 96 Query 401 AACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGA 460 ||| ||||||||||||||||||||||||||||||||||||| | | | |||||||| Sbjct 95 AACCATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTACCGCCCGTGTGTACTTAGA 36 Query 461 CATGCATGGCTTAATCTTTGAGACAAGCATATG 493 |||||||||||||| |||||||||||||||||| Sbjct 35 CATGCATGGCTTAAGCTTTGAGACAAGCATATG 3 >seq287799 Length=689 Score = 179 bits (198), Expect = 1e-42 Identities = 141/161 (88%), Gaps = 7/161 (4%) Strand=Plus/Plus Query 4 CTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCC 62 ||||||||||||||| | || | |||||| ||||||| ||||| | |||||||||||| Sbjct 535 CTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTT-TCGTCACTACCTCC 593 Query 63 CCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTC 122 | | ||||| | ||||||| |||||| ||||||||||||||||||||||||||||||| Sbjct 594 CGG-GTCGGAGT--GGTAATT-GCGCGC-TGCTGCCTTCCTTGGATGTGGTAGCCGTTTC 648 Query 123 TCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTAC 163 |||||||||||||||||||||||||||| ||||||||| || Sbjct 649 TCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTCAC 689 >seq218695 Length=3286 Score = 138 bits (152), Expect = 3e-30 Identities = 130/164 (79%), Gaps = 5/164 (3%) Strand=Plus/Minus Query 344 GCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTA----AGGTACTATCAAAT 399 |||||||||||||||||||||||||| | |||||| || ||| | ||| Sbjct 2845 GCATGTATTAGCTCTAGAATTACCACAGCTATCCAAAGAGCGGGAGAGGAGGGACAAAAG 2786 Query 400 AAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAG 459 ||| |||||||||||||| ||||||| | |||||||||||| || | ||||||| Sbjct 2785 GAACCATAACTGATTTAATAAGCCATTTGGAGTTTCACTGTACCACCTGTGTGTACTTAG 2726 Query 460 ACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCA 503 ||||||||||||||| || ||||||||||||||| ||||||||| Sbjct 2725 ACATGCATGGCTTAAGCTCTGAGACAAGCATATG-CTACTGGCA 2683 >seq262084 Length=331 Score = 116 bits (128), Expect = 1e-23 Identities = 91/105 (87%), Gaps = 3/105 (3%) Strand=Plus/Minus Query 4 CTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCC 62 ||||||||||||||| | || | |||||| ||||||| ||||| | |||||||||||| Sbjct 103 CTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACTACCTCC 44 Query 63 CCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGA 107 | | ||||| | ||||||||||||||||||||||||||||||||| Sbjct 43 CGG-GTCGG-AGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1504999640320