Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haliaeetus_20albicilla_20[refseq_20GCF_5F000691405.1_202014-05-15] 50,905 sequences; 1,133,549,865 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq2649 98.7 1e-18 >seq2649 Length=18401 Score = 98.7 bits (108), Expect = 1e-18 Identities = 166/231 (72%), Gaps = 17/231 (7%) Strand=Plus/Plus Query 11 CAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCTCGTTGAAG 70 ||||||| || ||||| |||||| ||||| | ||||||||||||| ||| | | | | Sbjct 15992 CAGGGACTTAATCAACATGAGCTT-ATGACCCAAACTTACTAGGAATT-CCTTGCTCAGG 16049 Query 71 ACCAACAA-TTGCAATGATCTATCCCCATCACGATGAAAT----TTCAAAGA-TTACCCG 124 ||| || |||||| | |||||| |||| |||| ||||| | ||||||| Sbjct 16050 CGCAAAAAATTGCAACGCCTGATCCCCTTCAC----AAATGGGGTTCAATGGGTTACCCG 16105 Query 125 GACCTGTCGGCCAAGGTGATAGACTC--GTTGAATACATCAGTGTAGCGCGCGTGCGGCC 182 |||| || ||| ||| | | | ||| |||| |||||||| |||| ||| Sbjct 16106 CGCCTGCTGGTACAGGG--TAGGCGCAAGCTGAGCCAGTCAGCGTAGCGCGTGTGCAGCC 16163 Query 183 CAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 | | |||||||||||||||||||||||||||||| ||||| || ||||| Sbjct 16164 CCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGGGTGGC 16213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751629157075