Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haliaeetus_20albicilla_20[refseq_20GCF_5F000691405.1_202014-05-15] 50,905 sequences; 1,133,549,865 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq2649 84.2 3e-14 seq30842 78.8 1e-12 >seq2649 Length=18401 Score = 84.2 bits (92), Expect = 3e-14 Identities = 59/66 (89%), Gaps = 1/66 (2%) Strand=Plus/Plus Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74 ||||| |||||||| |||| |||| | |||||||||||||||||||||||||||||| || Sbjct 16141 GTCAGCGTAGCGCGTGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CT 16199 Query 75 CAAACT 80 ||| || Sbjct 16200 CAATCT 16205 >seq30842 Length=9391 Score = 78.8 bits (86), Expect = 1e-12 Identities = 71/88 (81%), Gaps = 6/88 (7%) Strand=Plus/Minus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 ||| |||||| | | |||| ||| |||||| ||||||||||||||||| |||| Sbjct 8068 CTAGTTAGCATGCCA--GTCTTGTTTGTTATCAGAATTAACCAGACAAATTGCTCC---- 8015 Query 202 ACTAAGAACGGCCATGCACCACCACCCA 229 ||||||||| ||||||||||||||||| Sbjct 8014 ACTAAGAACAACCATGCACCACCACCCA 7987 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796407064305