Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haliaeetus_20albicilla_20[refseq_20GCF_5F000691405.1_202014-05-15] 50,905 sequences; 1,133,549,865 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq28639 324 2e-86 seq26179 271 1e-70 seq8347 179 6e-43 seq38789 120 5e-25 seq29826 89.7 9e-16 seq28317 80.6 5e-13 >seq28639 Length=16077 Score = 324 bits (358), Expect = 2e-86 Identities = 226/257 (88%), Gaps = 0/257 (0%) Strand=Plus/Plus Query 33 ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATT 92 |||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| Sbjct 7511 ATCAGTAGGGTAAAACTAACCTGTCTCACGAAGGTCTAAACCCAGCTCACGTTCCCTATT 7570 Query 93 AGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACA 152 ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| Sbjct 7571 AGTGGGTGAACAATCCAACGCTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGACA 7630 Query 153 TCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCT 212 ||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| Sbjct 7631 TCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCCCT 7690 Query 213 GTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCC 272 ||||||||||||||| |||||| || | ||| | | | |||||||| ||||| Sbjct 7691 GTGGTAACTTTTCTGACACCTCCTGCTTAAAACCCAAAAAGCCAGAAGGATCGTGAGGCC 7750 Query 273 ACACTTTCATGGTTTGT 289 | |||||| ||| ||| Sbjct 7751 CCGCTTTCACGGTCTGT 7767 >seq26179 Length=41588 Score = 271 bits (300), Expect = 1e-70 Identities = 202/235 (86%), Gaps = 1/235 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| |||| | || ||||||||||||||||||||||||||||| Sbjct 7582 TACTGAGCAGGATTACTATTGCAACAACACATCATCAGTAGGGTAAAACTAACCTGTCTC 7523 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | | |||||| ||||||||| |||||||||||||||||||||||||| |||||| | Sbjct 7522 GCGGCAGTCTAATCCCAGCTCATGTTCCCTATTAGTGGGTGAACAATCCCACGCTTGGTG 7463 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 | |||||||||| ||||||||||||||| ||||||||| |||||||||||| ||| ||| Sbjct 7462 AGTTCTGCTTCGCAATGATAGGAAGAGCCAACATCGAAGAATCAAAAAGCAAAGTCACTA 7403 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTC 234 |||||||||||| || |||||||| ||||||||||||||||||||||| ||||| Sbjct 7402 TGAACGCTTGGCCGCTACAAGCCAATTATCCCTGTGGTAACTTTTCTGATACCTC 7348 >seq8347 Length=458 Score = 179 bits (198), Expect = 6e-43 Identities = 141/169 (83%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||||||| |||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct 458 ATTCTGCTTCACAATGATAGGAAGAGCCGACATTGAAGGATCAAAAAGCGACGTCGCTAT 399 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 || |||||||| ||||||||||||||||||||||||||||||||||| |||||| || | Sbjct 398 GAGCGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCCTGCTT 339 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGT 289 ||| | | | |||||||| ||||| | |||||| ||| ||| Sbjct 338 AAAACCCAAAAAGCCAGAAGGATCGTGAGGCCCCGCTTTCACGGTCTGT 290 >seq38789 Length=37615 Score = 120 bits (132), Expect = 5e-25 Identities = 83/93 (89%), Gaps = 1/93 (1%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||||| |||||| ||||| |||||| ||||| ||||||| Sbjct 8957 TCATCAGTAGGGTAAAACTAACCTGTGTCATGATGGTCT-AACCCAACTCACATTCCCTA 9015 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATT 123 |||||||||||||||| || ||||| ||||| Sbjct 9016 TTAGTGGGTGAACAATTCAGCGCTTGGTGAATT 9048 >seq29826 Length=5513 Score = 89.7 bits (98), Expect = 9e-16 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||| | ||||||||| |||| ||||| | | ||||||| ||| ||| ||||||| Sbjct 1975 TCATTGGAAGGGTAAAAGTAACTTGTCTAACCATAGTCTAAATGCAGTTCATGTTCCCTG 2034 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 |||||| |||| | ||| | | | || ||| |||| ||| | |||||||||| | Sbjct 2035 GTAGTGGATGAATTACCCAGCACCTGGTAAAGTCTCCTTCAGTACAACAGGAAGAGCCAA 2094 Query 151 CATCGAAGGATCAAAAAGCAA-CGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATC 209 |||| | || ||||| ||| | | ||| ||| | | || | || |||||||| Sbjct 2095 CATCTCTGAATAAAAAAACAATCATGCCTAA-AACACGTAGCCACTTCAGATCAGTTATC 2153 Query 210 CCTGTGGTAACTTTTCTG 227 |||||||||||| || || Sbjct 2154 CCTGTGGTAACTATTTTG 2171 >seq28317 Length=127186 Score = 80.6 bits (88), Expect = 5e-13 Identities = 55/61 (90%), Gaps = 1/61 (2%) Strand=Plus/Minus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 |||||||| ||||||| ||||||||||||||| ||||| ||||||||||| ||||||| | Sbjct 123018 CATCAGTAAGGTAAAAGTAACCTGTCTCATGATGGTCT-AACCCAGCTCATGTTCCCTCT 122960 Query 92 T 92 | Sbjct 122959 T 122959 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 853965067680