Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Haliaeetus_20albicilla_20[refseq_20GCF_5F000691405.1_202014-05-15]
50,905 sequences; 1,133,549,865 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq21231 194 5e-47
seq41864 100 9e-19
seq26179 84.2 7e-14
>seq21231
Length=17470
Score = 194 bits (214), Expect = 5e-47
Identities = 163/200 (82%), Gaps = 4/200 (2%)
Strand=Plus/Minus
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCA- 295
|||||| || ||||| ||||| | ||| || || | | |||| |||||| |||
Sbjct 3663 CTCCCATTTGTTCTATTCCTCTGATGTCTCTTTGCAGTGCCAGACTGGAGTCATGCTTCT 3604
Query 296 ---ACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCG 352
||||||||||||||||| |||||||| |||||||| |||| ||||||||| |||| |
Sbjct 3603 TTCACAGGGTCTTCTTTCCCTGCTGATTCTGCCAAGCCTGTTCTCTTGGCTGTCGTTTTG 3544
Query 353 CTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTA 412
|| ||||||| ||||||||||||||||||| || |||||||||||| | |||||||||
Sbjct 3543 CTTGATAGTAACTAGGGACAGTGGGAATCTCATTTATCCATTCATGCACATCACTAATTG 3484
Query 413 GATGACGAGGCATTTGGCTA 432
||||| ||||||||||||||
Sbjct 3483 GATGATGAGGCATTTGGCTA 3464
>seq41864
Length=1996
Score = 100 bits (110), Expect = 9e-19
Identities = 72/82 (88%), Gaps = 1/82 (1%)
Strand=Plus/Plus
Query 434 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTT 493
||||| | |||||||| || | | ||| ||| ||||||||| |||||||||||||||||
Sbjct 1209 CTTAAAA-AGTCATAGATATTTCTGCCTTTTTCCCGCGCTTCATTGAATTTCTTCACTTT 1267
Query 494 GACATTCAGAGCACTGGGCAGA 515
||||||||||||||||||||||
Sbjct 1268 GACATTCAGAGCACTGGGCAGA 1289
>seq26179
Length=41588
Score = 84.2 bits (92), Expect = 7e-14
Identities = 84/108 (78%), Gaps = 1/108 (1%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTT-AT 65
||| |||||| | |||| |||| | |||| |||| | ||||||||||| |||||| ||
Sbjct 7255 CTTCTGCTCTGCGGGAGGTTTCCGACCTCCCTGAGCTCGCCTTAGGACACTTGCGTTAAT 7196
Query 66 GGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113
| ||| |||| || | ||||||| ||||| |||||| || || ||||
Sbjct 7195 GCTTTGACAGGGGTACTGCCCCAGTCAAACCCCCCACTTGCCACTGTC 7148
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1634367601440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |