Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haliaeetus_20albicilla_20[refseq_20GCF_5F000691405.1_202014-05-15] 50,905 sequences; 1,133,549,865 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq21231 194 5e-47 seq41864 100 9e-19 seq26179 84.2 7e-14 >seq21231 Length=17470 Score = 194 bits (214), Expect = 5e-47 Identities = 163/200 (82%), Gaps = 4/200 (2%) Strand=Plus/Minus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCA- 295 |||||| || ||||| ||||| | ||| || || | | |||| |||||| ||| Sbjct 3663 CTCCCATTTGTTCTATTCCTCTGATGTCTCTTTGCAGTGCCAGACTGGAGTCATGCTTCT 3604 Query 296 ---ACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCG 352 ||||||||||||||||| |||||||| |||||||| |||| ||||||||| |||| | Sbjct 3603 TTCACAGGGTCTTCTTTCCCTGCTGATTCTGCCAAGCCTGTTCTCTTGGCTGTCGTTTTG 3544 Query 353 CTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTA 412 || ||||||| ||||||||||||||||||| || |||||||||||| | ||||||||| Sbjct 3543 CTTGATAGTAACTAGGGACAGTGGGAATCTCATTTATCCATTCATGCACATCACTAATTG 3484 Query 413 GATGACGAGGCATTTGGCTA 432 ||||| |||||||||||||| Sbjct 3483 GATGATGAGGCATTTGGCTA 3464 >seq41864 Length=1996 Score = 100 bits (110), Expect = 9e-19 Identities = 72/82 (88%), Gaps = 1/82 (1%) Strand=Plus/Plus Query 434 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTT 493 ||||| | |||||||| || | | ||| ||| ||||||||| ||||||||||||||||| Sbjct 1209 CTTAAAA-AGTCATAGATATTTCTGCCTTTTTCCCGCGCTTCATTGAATTTCTTCACTTT 1267 Query 494 GACATTCAGAGCACTGGGCAGA 515 |||||||||||||||||||||| Sbjct 1268 GACATTCAGAGCACTGGGCAGA 1289 >seq26179 Length=41588 Score = 84.2 bits (92), Expect = 7e-14 Identities = 84/108 (78%), Gaps = 1/108 (1%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTT-AT 65 ||| |||||| | |||| |||| | |||| |||| | ||||||||||| |||||| || Sbjct 7255 CTTCTGCTCTGCGGGAGGTTTCCGACCTCCCTGAGCTCGCCTTAGGACACTTGCGTTAAT 7196 Query 66 GGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 | ||| |||| || | ||||||| ||||| |||||| || || |||| Sbjct 7195 GCTTTGACAGGGGTACTGCCCCAGTCAAACCCCCCACTTGCCACTGTC 7148 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1634367601440