Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Haliaeetus_20leucocephalus_20[refseq_20GCF_5F000737465.1_202014-08-
04] 1,023 sequences; 1,178,409,481 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq1 147 3e-33
>seq1
Length=30461450
Score = 147 bits (162), Expect = 3e-33
Identities = 170/224 (76%), Gaps = 4/224 (2%)
Strand=Plus/Plus
Query 11 CAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCTCGTTGAAG 70
||||||| || ||||| |||||| ||||| | ||||||||||||| ||||||| | |
Sbjct 1851264 CAGGGACTTAATCAACATGAGCTT-ATGACCCAAACTTACTAGGAATT-CCTCGTTCACG 1851321
Query 71 ACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TTACCCGGACCT 129
|| ||||||||| | ||||||||||||| ||||| | ||||||| |||
Sbjct 1851322 GGGAAGAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCAACGGGTTACCCGCGCCT 1851381
Query 130 GTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACA 189
| |||| ||| | || | ||| ||||||||||||||||||||||| | |||
Sbjct 1851382 GCCGGCGGAGGGTAGGCACAAGCTGAGCCAGTCAGTGTAGCGCGCGTGCGGCCCCGGACA 1851441
Query 190 TCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233
||||||||||||||||||||||||||| ||||| || |||||
Sbjct 1851442 TCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGGGTGGC 1851484
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751992547445
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |