Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haliaeetus_20leucocephalus_20[refseq_20GCF_5F000737465.1_202014-08- 04] 1,023 sequences; 1,178,409,481 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq1 147 3e-33 >seq1 Length=30461450 Score = 147 bits (162), Expect = 3e-33 Identities = 170/224 (76%), Gaps = 4/224 (2%) Strand=Plus/Plus Query 11 CAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCTCGTTGAAG 70 ||||||| || ||||| |||||| ||||| | ||||||||||||| ||||||| | | Sbjct 1851264 CAGGGACTTAATCAACATGAGCTT-ATGACCCAAACTTACTAGGAATT-CCTCGTTCACG 1851321 Query 71 ACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TTACCCGGACCT 129 || ||||||||| | ||||||||||||| ||||| | ||||||| ||| Sbjct 1851322 GGGAAGAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCAACGGGTTACCCGCGCCT 1851381 Query 130 GTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACA 189 | |||| ||| | || | ||| ||||||||||||||||||||||| | ||| Sbjct 1851382 GCCGGCGGAGGGTAGGCACAAGCTGAGCCAGTCAGTGTAGCGCGCGTGCGGCCCCGGACA 1851441 Query 190 TCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 ||||||||||||||||||||||||||| ||||| || ||||| Sbjct 1851442 TCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGGGTGGC 1851484 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751992547445