Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Haliaeetus_20leucocephalus_20[refseq_20GCF_5F000737465.1_202014-08-
04] 1,023 sequences; 1,178,409,481 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq954 178 2e-42
seq557 91.5 3e-16
>seq954
Length=4320062
Score = 178 bits (196), Expect = 2e-42
Identities = 208/276 (75%), Gaps = 4/276 (1%)
Strand=Plus/Plus
Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGA-CTTTTACTTTGAAAAAATTAGAGTGT 97
|||||||| ||| |||| ||| || ||| | | | |||||||||| |||||||||||||
Sbjct 1553759 ATGCCCTTAGCTGAGTGTCCCGCGGGGCCCGAAGCGTTTACTTTGAGAAAATTAGAGTGT 1553818
Query 98 TCAAAGCAGGCCTTT-GCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTT 156
|||||||||||| || | |||| ||| |||||||| ||||||||| | |||||
Sbjct 1553819 TCAAAGCAGGCCGGCCGCCGGCATACTGCAGCTAGGAATAATGGAATAGGAC-TCCGGTT 1553877
Query 157 CTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGT 216
||||||||||||||| | | || | |||||||| ||||| | |||||| | ||
Sbjct 1553878 CTATTTTGTTGGTTTTCGGAAACGGGGCCATGATTAAGAGGGACGGCCGGGGGCATTCGT 1553937
Query 217 ATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTT 276
||| | |||||||||||||||||| ||||| ||| |||||||| ||
Sbjct 1553938 ATTGTGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGGCCTAGAGCGAAAGCATT 1553997
Query 277 CACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312
||||| |||||||||||||||| ||||||||||
Sbjct 1553998 TGCCAAGAATGTTTTCATTAATCA-AGAACGAAAGT 1554032
>seq557
Length=7899598
Score = 91.5 bits (100), Expect = 3e-16
Identities = 118/162 (73%), Gaps = 1/162 (1%)
Strand=Plus/Plus
Query 140 GAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGA 199
||||||||| | ||||| |||||||||||||| | | | | | ||||||| |||||
Sbjct 249872 GAATAGGAC-TCCGGTTATATTTTGTTGGTTTTTGGCAACAGGGCCTTGATTAAGAGGGA 249930
Query 200 TAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTA 259
| | |||| || ||||| || ||||||||||||||||| | | ||||
Sbjct 249931 TGGCTGGGGTCATCTGTATTGTGCTGCTCGAGGTGAAATTCTTGGACTGGTGCAAGAAGG 249990
Query 260 ACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAG 301
||| | |||||| || ||||| |||||||||||||||||
Sbjct 249991 CCTAGAGTGAAAGCATTTGCCAAGAATGTTTTCATTAATCAG 250032
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915190637504
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |