Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haliaeetus_20leucocephalus_20[refseq_20GCF_5F000737465.1_202014-08- 04] 1,023 sequences; 1,178,409,481 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq1 98.7 2e-18 seq139 84.2 3e-14 >seq1 Length=30461450 Score = 98.7 bits (108), Expect = 2e-18 Identities = 62/66 (94%), Gaps = 1/66 (2%) Strand=Plus/Plus Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74 |||||||||||||||||||||||| | |||||||||||||||||||||||||||||| || Sbjct 1851412 GTCAGTGTAGCGCGCGTGCGGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CT 1851470 Query 75 CAAACT 80 ||| || Sbjct 1851471 CAATCT 1851476 >seq139 Length=2957850 Score = 84.2 bits (92), Expect = 3e-14 Identities = 72/88 (82%), Gaps = 6/88 (7%) Strand=Plus/Plus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 ||| |||||| | | |||| ||| |||||||||||||||||||||||| |||| Sbjct 982354 CTAGTTAGCATGCCA--GTCTTGTTTGTTATCGGAATTAACCAGACAAATTGCTCC---- 982407 Query 202 ACTAAGAACGGCCATGCACCACCACCCA 229 ||||||||| ||||||||||||||||| Sbjct 982408 ACTAAGAACAACCATGCACCACCACCCA 982435 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796792103463