Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haliaeetus_20leucocephalus_20[refseq_20GCF_5F000737465.1_202014-08- 04] 1,023 sequences; 1,178,409,481 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq1 161 2e-37 seq150 82.4 1e-13 >seq1 Length=30461450 Score = 161 bits (178), Expect = 2e-37 Identities = 165/214 (77%), Gaps = 1/214 (0%) Strand=Plus/Minus Query 106 AGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTAC 165 || ||||| |||||||||||||||||||||||||||||| | |||||||||||||||||| Sbjct 1851476 AGATTGAG-CAATAACAGGTCTGTGATGCCCTTAGATGTCCGGGGCCGCACGCGCGCTAC 1851418 Query 166 ACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACT 225 |||||| | || | || | | ||| ||||| ||| |||||| | | || | Sbjct 1851417 ACTGACTGGCTCAGCTTGTGCCTACCCTCCGCCGGCAGGCGCGGGTAACCCGTTGAACCC 1851358 Query 226 CTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAG 285 | ||||| ||||||| | | ||||||||| || | | | |||||||||| ||||||||| Sbjct 1851357 CATTCGTGATGGGGATCGGGGATTGCAATTCTTCCCCGTGAACGAGGAATTCCTAGTAAG 1851298 Query 286 CGCGTGTCATCAGCACGCGTTGATTACGTCCCTG 319 | ||||| ||| | |||||||| ||||||| Sbjct 1851297 TTTGGGTCATAAGCTCATGTTGATTAAGTCCCTG 1851264 >seq150 Length=2537645 Score = 82.4 bits (90), Expect = 1e-13 Identities = 77/98 (79%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 231 GTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGT 290 ||| ||||||| ||| |||||||||||| | | | || ||||||| || |||||| | | Sbjct 1571544 GTGATGGGGATTGAGGATTGCAATTATTCCCCATGAATGAGGAATTCCCAGTAAGTGTGG 1571603 Query 291 GTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 | ||| | | ||| ||||||| |||||||| |||||| Sbjct 1571604 GGCATAAACTCGCTTTGATTAAGTCCCTGCTTTTTGTA 1571641 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947190310144