Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Haliaeetus_20leucocephalus_20[refseq_20GCF_5F000737465.1_202014-08-
04] 1,023 sequences; 1,178,409,481 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq343 95.1 2e-17
seq93 73.4 6e-11
>seq343
Length=56173
Score = 95.1 bits (104), Expect = 2e-17
Identities = 91/114 (80%), Gaps = 2/114 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| | ||| |||| || |||| || || |
Sbjct 25490 GTACGAGAGGAACCGCAGG-TTCAGACCCCT-GGTGCGTGCGCTTGGCTGAGGAGCCACT 25433
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
| ||||| |||||||||||| || ||||| ||||||||||||||||||||||||
Sbjct 25432 GGCGCGAGGCTACCATCTGCGGGCTTATGACTGAACGCCTCTAAGTCAGAATCC 25379
>seq93
Length=17357808
Score = 73.4 bits (80), Expect = 6e-11
Identities = 85/112 (76%), Gaps = 2/112 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||| | | || ||| | ||| | |||| || |||| || || |
Sbjct 15081814 GTACGAGAGGAACCACAGG-TTGAGAGCCCT-GGTGTGTGCGCTTGGCTGAGGAGCCACT 15081757
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAAT 112
| |||| ||||||||||| || ||||| |||||| |||||||||||||||
Sbjct 15081756 GGTGCGAGGCTACCATCTGTGGGCTTATGACTGAACACCTCTAAGTCAGAAT 15081705
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819191881472
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |