Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haliaeetus_20leucocephalus_20[refseq_20GCF_5F000737465.1_202014-08- 04] 1,023 sequences; 1,178,409,481 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq343 95.1 2e-17 seq93 73.4 6e-11 >seq343 Length=56173 Score = 95.1 bits (104), Expect = 2e-17 Identities = 91/114 (80%), Gaps = 2/114 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | |||||| | ||| |||| || |||| || || | Sbjct 25490 GTACGAGAGGAACCGCAGG-TTCAGACCCCT-GGTGCGTGCGCTTGGCTGAGGAGCCACT 25433 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 | ||||| |||||||||||| || ||||| |||||||||||||||||||||||| Sbjct 25432 GGCGCGAGGCTACCATCTGCGGGCTTATGACTGAACGCCTCTAAGTCAGAATCC 25379 >seq93 Length=17357808 Score = 73.4 bits (80), Expect = 6e-11 Identities = 85/112 (76%), Gaps = 2/112 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||| | | || ||| | ||| | |||| || |||| || || | Sbjct 15081814 GTACGAGAGGAACCACAGG-TTGAGAGCCCT-GGTGTGTGCGCTTGGCTGAGGAGCCACT 15081757 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAAT 112 | |||| ||||||||||| || ||||| |||||| ||||||||||||||| Sbjct 15081756 GGTGCGAGGCTACCATCTGTGGGCTTATGACTGAACACCTCTAAGTCAGAAT 15081705 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819191881472