Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haliaeetus_20leucocephalus_20[refseq_20GCF_5F000737465.1_202014-08- 04] 1,023 sequences; 1,178,409,481 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq309 86.0 3e-11 >seq309 Length=123477 Score = 86.0 bits (94), Expect = 3e-11 Identities = 98/132 (74%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 349084 CTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGCAAAGTGGAA 349143 |||||| | | ||| | ||||||||| ||||||||||| | ||| ||||| ||||||| Sbjct 77679 CTCCTTCAAGCGGGGGACGCCCAGGGTGACGTTCTTGGCTGAGACCCCGGCGTAGTGGAA 77620 Query 349144 GGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGAGGATGCCTAC 349203 ||| | |||||||| ||| ||| ||||| || | ||||| | || || || || Sbjct 77619 GGTGTTGAGGGTCATCTGGGTGGCTGGCTCTCCCAGCGACTGGGCTGCCAGTGCCCCCAC 77560 Query 349204 CATCTCGCCGGG 349215 |||||| || || Sbjct 77559 CATCTCCCCAGG 77548 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084711208467354