Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepidothrix_20coronata_20[refseq_20GCF_5F001604755.1_202016-03-31] 4,612 sequences; 1,079,577,334 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq1966 125 4e-27 >seq1966 Length=3153 Score = 125 bits (138), Expect = 4e-27 Identities = 100/118 (85%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAG-TCAAAATGATAACATCGCC 59 ||||||||||||||||||||||| ||||||||| |||| | || | | ||||| | | Sbjct 1169 GAACCCAAAGACTTTGATTTCTCATAAGGTGCC-AGCGGGGTCCTATTAGTAACACCCGC 1111 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||| |||||||| ||||| |||| |||||| |||||||||||||||||||||| Sbjct 1110 TGATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGA 1053 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278387962680