Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepidothrix_20coronata_20[refseq_20GCF_5F001604755.1_202016-03-31] 4,612 sequences; 1,079,577,334 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq68 192 1e-46 seq182 122 1e-25 >seq68 Length=4902906 Score = 192 bits (212), Expect = 1e-46 Identities = 202/263 (77%), Gaps = 7/263 (3%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||| |||||| |||||||||||||||||| || | |||| ||||| ||| | |||| Sbjct 698281 TCATGAGTAGG-TAAAACTAACCTGTCTCACAACAGCCTAATCCCAGATCATATCCCCTG 698223 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 || ||||||| ||||||| || | |||||||||||| |||| |||||||| || Sbjct 698222 TTT-TGGGTGAGCAATCCAGTGCCTGATGAATTCTGCTTCACAATGACTGGAAGAGCTGA 698164 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 || |||||||||||| || || | ||||| ||||||||||||||||||||||||| Sbjct 698163 GATTGAAGGATCAAAATGCGAC-----TGTGAACACTTGGCTGCCACAAGCCAGTTATCC 698109 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270 ||||||| | ||||||| |||||| || | ||| | | | |||||||| ||| Sbjct 698108 CTGTGGTCAATTTTCTGACACCTCCTGCTTAAAACCCAAAAAGCCAGAAGGATCGTGAGG 698049 Query 271 CCACACTTTCATGGTTTGTATTC 293 || | |||||| ||| ||||||| Sbjct 698048 CCCCGCTTTCACGGTCTGTATTC 698026 >seq182 Length=1952995 Score = 122 bits (134), Expect = 1e-25 Identities = 106/132 (80%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 162 CAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACT 221 ||||||| || | |||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1222573 CAAAAAGATACATTGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACT 1222632 Query 222 TTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCA 281 |||||| |||||| || | ||| | | | ||||||| ||||| |||||||| Sbjct 1222633 TTTCTGACACCTCCTGCTTAAAACCCAAAAAGCCAGAAGGATCATGAGGCCCCACTTTCA 1222692 Query 282 TGGTTTGTATTC 293 ||| ||||||| Sbjct 1222693 CGGTCTGTATTC 1222704 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854360595072