Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lonchura_20striata_20domestica_20[refseq_20GCF_5F002197715.1_202017- 06-19] 3,014 sequences; 1,060,169,706 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq1267 95.1 5e-17 >seq1267 Length=1547202 Score = 95.1 bits (104), Expect = 5e-17 Identities = 87/110 (79%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 569 GGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGA 628 ||||| ||||||||||||||||||||||| |||| ||||||||| ||||||||||||| Sbjct 193000 GGACCTGAAAGATGGTGAACTATGCCTGAGCAGGGCAAAGCCAGAGAAAACTCTGGTGGA 193059 Query 629 GGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGG 678 || | ||| | ||| | ||||||| | || || | ||||| |||| Sbjct 193060 GGTCCATAGCCATCCTGACATGCAAATTGTTCATCCTACCTGGGTCTAGG 193109 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079935349700