Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lonchura_20striata_20domestica_20[refseq_20GCF_5F002197715.1_202017- 06-19] 3,014 sequences; 1,060,169,706 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq1444 86.0 1e-14 >seq1444 Length=6391733 Score = 86.0 bits (94), Expect = 1e-14 Identities = 71/86 (83%), Gaps = 3/86 (3%) Strand=Plus/Minus Query 176 AATTAACCAGACAAATCA---CTCCACCAACTAAGAACGGCCATGCACCACCACCCATAG 232 |||||||||||||| | | |||||||||||||||| |||||||||||| ||| | || Sbjct 4271171 AATTAACCAGACAATTAATTGCTCCACCAACTAAGAAAGGCCATGCACCATCACTAACAG 4271112 Query 233 AATCAAGAAAGAGCTATCAATCTGTC 258 ||| |||||||||| || |||||| Sbjct 4271111 AATTGAGAAAGAGCTCTCCCTCTGTC 4271086 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796776734934