Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lonchura_20striata_20domestica_20[refseq_20GCF_5F002197715.1_202017- 06-19] 3,014 sequences; 1,060,169,706 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq1334 134 2e-29 >seq1334 Length=1515766 Score = 134 bits (148), Expect = 2e-29 Identities = 166/226 (73%), Gaps = 1/226 (0%) Strand=Plus/Plus Query 67 TCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTG 126 |||| |||||||||| |||| | | || ||| ||||||| || ||| |||| Sbjct 860614 TCTAGTCCCAGCTCACACCCCCTGTGACAGG-TGAGCAATCCAGTGCCGGGTGAACTCTG 860672 Query 127 CTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGC 186 |||| | ||||||||||||| | || |||||||||||||||| || ||||||| | | Sbjct 860673 CTTCCCAAGGATAGGAAGAGCCAATATGAAAGGATCAAAAAGCAAGGTTGCTATGAGCAC 860732 Query 187 TTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATT 246 |||||||||||||||||| ||||||||||||||| || |||||| || | ||| Sbjct 860733 TTGGCTGCCACAAGCCAGACCCCCCTGTGGTAACTTTCCTAACACCTCCTGCTTAAAACA 860792 Query 247 TCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATT 292 | | | | ||| ||| | ||| ||||||||||| ||| || Sbjct 860793 CCAAAAGGCAGAAGAATCATGATGCCTCACTTTCATGGGCTGTGTT 860838 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854374248384