Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lonchura_20striata_20domestica_20[refseq_20GCF_5F002197715.1_202017-
06-19] 3,014 sequences; 1,060,169,706 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq1334 134 2e-29
>seq1334
Length=1515766
Score = 134 bits (148), Expect = 2e-29
Identities = 166/226 (73%), Gaps = 1/226 (0%)
Strand=Plus/Plus
Query 67 TCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTG 126
|||| |||||||||| |||| | | || ||| ||||||| || ||| ||||
Sbjct 860614 TCTAGTCCCAGCTCACACCCCCTGTGACAGG-TGAGCAATCCAGTGCCGGGTGAACTCTG 860672
Query 127 CTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGC 186
|||| | ||||||||||||| | || |||||||||||||||| || ||||||| | |
Sbjct 860673 CTTCCCAAGGATAGGAAGAGCCAATATGAAAGGATCAAAAAGCAAGGTTGCTATGAGCAC 860732
Query 187 TTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATT 246
|||||||||||||||||| ||||||||||||||| || |||||| || | |||
Sbjct 860733 TTGGCTGCCACAAGCCAGACCCCCCTGTGGTAACTTTCCTAACACCTCCTGCTTAAAACA 860792
Query 247 TCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATT 292
| | | | ||| ||| | ||| ||||||||||| ||| ||
Sbjct 860793 CCAAAAGGCAGAAGAATCATGATGCCTCACTTTCATGGGCTGTGTT 860838
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854374248384
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |