Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lonchura_20striata_20domestica_20[refseq_20GCF_5F002197715.1_202017-
06-19] 3,014 sequences; 1,060,169,706 total letters
Query= NC_027867.1
Length=651523
Score E
Sequences producing significant alignments: (Bits) Value
seq2534 98.7 4e-15
>seq2534
Length=279983
Score = 98.7 bits (108), Expect = 4e-15
Identities = 101/132 (77%), Gaps = 0/132 (0%)
Strand=Plus/Plus
Query 349084 CTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGCAAAGTGGAA 349143
||||||||| | |||| |||||| || ||||||||||||| || || || |||||||
Sbjct 56361 CTCCTTGAGGCGCGGCACGCCCAGCGTGACGTTCTTGGCCGACACCCCCGCGTAGTGGAA 56420
Query 349144 GGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGAGGATGCCTAC 349203
||| | |||||||| ||||||| |||||||| | | |||| | || || ||| ||
Sbjct 56421 GGTGTTGAGGGTCATCTGCGTGGCCGGCTCGCCCAGGGACTGCGCGGCCAGAGCGCCCAC 56480
Query 349204 CATCTCGCCGGG 349215
||| || |||||
Sbjct 56481 CATTTCCCCGGG 56492
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2084656730323172
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |