Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lyrurus_20tetrix_20tetrix_20[genbank_20GCA_5F000586395.1_202014-03- 08] 971,998 sequences; 657,025,294 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq971085 134 2e-29 seq970681 86.0 1e-14 >seq971085 Length=235 Score = 134 bits (148), Expect = 2e-29 Identities = 161/215 (75%), Gaps = 3/215 (1%) Strand=Plus/Plus Query 99 CAAAGCAGGCCTTT-GCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTC 157 ||||||||||| || |||||| ||| |||||||| ||||||||| | |||||| Sbjct 1 CAAAGCAGGCCGGCCGCCGGAATACTCCAGCTAGGAATAATGGAATAGGAC-TCCGGTTC 59 Query 158 TATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTA 217 |||||||||||||| | | || | |||||||| ||||| | |||||| | ||| Sbjct 60 TATTTTGTTGGTTTTCGGAAACGGGGCCATGATTAAGAGGGACGGCCGGGGGCATTCGTA 119 Query 218 TTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTC 277 || | |||||||||||||||||| ||||| ||||| |||||||| || Sbjct 120 TTGTGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGAACTAAAGCGAAAGCATTT 179 Query 278 ACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312 ||||| |||||||||||||||| |||||||||| Sbjct 180 GCCAAGAATGTTTTCATTAATCA-AGAACGAAAGT 213 >seq970681 Length=211 Score = 86.0 bits (94), Expect = 1e-14 Identities = 96/127 (76%), Gaps = 1/127 (1%) Strand=Plus/Plus Query 186 ATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGA 245 |||||||| ||||| | |||||| | ||||| | |||||||||||||||||| Sbjct 16 ATGATTAAGAGGGACGGCCGGGGGCATTCGTATTGTGCCGCTAGAGGTGAAATTCTTGGA 75 Query 246 TTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAA 305 ||||| ||||| |||||||| || ||||| |||||||||||||||| ||| Sbjct 76 CCGGCGCAAGACGAACTAAAGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCA-AGAA 134 Query 306 CGAAAGT 312 ||||||| Sbjct 135 CGAAAGT 141 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 906304274304