Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lyrurus_20tetrix_20tetrix_20[genbank_20GCA_5F000586395.1_202014-03- 08] 971,998 sequences; 657,025,294 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq971420 170 3e-40 seq971086 161 2e-37 seq971087 114 2e-23 seq426851 89.7 8e-16 >seq971420 Length=211 Score = 170 bits (188), Expect = 3e-40 Identities = 145/177 (82%), Gaps = 4/177 (2%) Strand=Plus/Minus Query 86 TGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCA-TAGTCGATGGGG--- 141 |||||| | |||| | |||||||||||||| | | || ||| | | | | | | Sbjct 209 TGGCTGAACGCCACTTGTCCCTCTAAGAAGTTGGACGCCGACCGCTCGGGGGTCGCGTAA 150 Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 ||| |||||| | | |||||||||||||||||||||||||||||||||| |||||||| Sbjct 149 CTAGTTAGCATGCCAGAGTCTCGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCA 90 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||||||||||||||||||| ||||| |||||||||| |||||||||| Sbjct 89 ACTAAGAACGGCCATGCACCACCACCCACGGAATCGAGAAAGAGCTCTCAATCTGTC 33 >seq971086 Length=299 Score = 161 bits (178), Expect = 2e-37 Identities = 106/117 (91%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 ||| |||||| | | |||||||||||||||||||||||||||||||||| |||||||| Sbjct 271 CTAGTTAGCATGCCAGAGTCTCGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCA 212 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||||||||||||||||||| ||||| |||||||||| |||||||||| Sbjct 211 ACTAAGAACGGCCATGCACCACCACCCACGGAATCGAGAAAGAGCTCTCAATCTGTC 155 >seq971087 Length=264 Score = 114 bits (126), Expect = 2e-23 Identities = 87/100 (87%), Gaps = 2/100 (2%) Strand=Plus/Minus Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74 ||||||||||||||||||| |||| | |||||||||||||||||||||||||||||| || Sbjct 98 GTCAGTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CT 40 Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAA 114 ||| | || |||||| | |||| | ||||||||||||| Sbjct 39 CAATC-TCGGGTGGCTGAACGCCACTTGTCCCTCTAAGAA 1 >seq426851 Length=588 Score = 89.7 bits (98), Expect = 8e-16 Identities = 73/89 (82%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 169 TTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCC 228 |||| ||||||||||||| || | |||||||||||||||| |||||| |||||| | || Sbjct 101 TTATTGGAATTAACCAGATAAGTAGCTCCACCAACTAAGAATGGCCATACACCACTAGCC 160 Query 229 ATAGAATCAAGAAAGAGCTATCAATCTGT 257 | ||||| |||||||| | | |||||| Sbjct 161 ACAGAATTGAGAAAGAGTTCTTGATCTGT 189 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 789297147438