Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lyrurus_20tetrix_20tetrix_20[genbank_20GCA_5F000586395.1_202014-03-
08] 971,998 sequences; 657,025,294 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq971420 170 3e-40
seq971086 161 2e-37
seq971087 114 2e-23
seq426851 89.7 8e-16
>seq971420
Length=211
Score = 170 bits (188), Expect = 3e-40
Identities = 145/177 (82%), Gaps = 4/177 (2%)
Strand=Plus/Minus
Query 86 TGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCA-TAGTCGATGGGG--- 141
|||||| | |||| | |||||||||||||| | | || ||| | | | | | |
Sbjct 209 TGGCTGAACGCCACTTGTCCCTCTAAGAAGTTGGACGCCGACCGCTCGGGGGTCGCGTAA 150
Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201
||| |||||| | | |||||||||||||||||||||||||||||||||| ||||||||
Sbjct 149 CTAGTTAGCATGCCAGAGTCTCGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCA 90
Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
|||||||||||||||||||||||||||| ||||| |||||||||| ||||||||||
Sbjct 89 ACTAAGAACGGCCATGCACCACCACCCACGGAATCGAGAAAGAGCTCTCAATCTGTC 33
>seq971086
Length=299
Score = 161 bits (178), Expect = 2e-37
Identities = 106/117 (91%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201
||| |||||| | | |||||||||||||||||||||||||||||||||| ||||||||
Sbjct 271 CTAGTTAGCATGCCAGAGTCTCGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCA 212
Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
|||||||||||||||||||||||||||| ||||| |||||||||| ||||||||||
Sbjct 211 ACTAAGAACGGCCATGCACCACCACCCACGGAATCGAGAAAGAGCTCTCAATCTGTC 155
>seq971087
Length=264
Score = 114 bits (126), Expect = 2e-23
Identities = 87/100 (87%), Gaps = 2/100 (2%)
Strand=Plus/Minus
Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74
||||||||||||||||||| |||| | |||||||||||||||||||||||||||||| ||
Sbjct 98 GTCAGTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CT 40
Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAA 114
||| | || |||||| | |||| | |||||||||||||
Sbjct 39 CAATC-TCGGGTGGCTGAACGCCACTTGTCCCTCTAAGAA 1
>seq426851
Length=588
Score = 89.7 bits (98), Expect = 8e-16
Identities = 73/89 (82%), Gaps = 0/89 (0%)
Strand=Plus/Plus
Query 169 TTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCC 228
|||| ||||||||||||| || | |||||||||||||||| |||||| |||||| | ||
Sbjct 101 TTATTGGAATTAACCAGATAAGTAGCTCCACCAACTAAGAATGGCCATACACCACTAGCC 160
Query 229 ATAGAATCAAGAAAGAGCTATCAATCTGT 257
| ||||| |||||||| | | ||||||
Sbjct 161 ACAGAATTGAGAAAGAGTTCTTGATCTGT 189
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 789297147438
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |