Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lyrurus_20tetrix_20tetrix_20[genbank_20GCA_5F000586395.1_202014-03- 08] 971,998 sequences; 657,025,294 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq586767 145 1e-32 seq264171 104 4e-20 >seq586767 Length=242 Score = 145 bits (160), Expect = 1e-32 Identities = 121/148 (82%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 78 CTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGA 137 ||||| |||||||| |||||||||||||| ||| |||| ||||| |||||| || | Sbjct 242 CTCACATTCCCTATGAGTGGGTGAACAATACAATGCTTGGTGAATTTTGCTTCACAATAA 183 Query 138 TAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCAC 197 ||||||| | || || |||||||||||||| | || |||||||| |||||||||||| Sbjct 182 CAGGAAGAACTGAAATTGAAGGATCAAAAAGTGATATCACTATGAACACTTGGCTGCCAC 123 Query 198 AAGCCAGTTATCCCTGTGGTAACTTTTC 225 ||| || ||||||||||||| |||||| Sbjct 122 AAGACAATTATCCCTGTGGTGGCTTTTC 95 >seq264171 Length=2010 Score = 104 bits (114), Expect = 4e-20 Identities = 75/87 (86%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 30 GTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCT 89 ||||||||||||||||||||||||||||||||||| |||||| | ||||||||||| | Sbjct 762 GTCATCAGTAGGGTAAAACTAACCTGTCTCATGACAGTCTAATCTGAGCTCACGTTCTTT 821 Query 90 ATTAGTGGGTGAACAATCCAACGCTTA 116 |||||| || ||||| | ||| |||| Sbjct 822 ATTAGTAGGCAAACAAGCTAACACTTA 848 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 846095249088