Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lyrurus_20tetrix_20tetrix_20[genbank_20GCA_5F000586395.1_202014-03- 08] 971,998 sequences; 657,025,294 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq970629 428 1e-117 seq174056 134 4e-29 >seq970629 Length=275 Score = 428 bits (474), Expect = 1e-117 Identities = 255/267 (96%), Gaps = 0/267 (0%) Strand=Plus/Minus Query 267 TTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCA 326 |||||| | | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 271 TTCACAGCGCCAGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCA 212 Query 327 AGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTT 386 |||||||||||||||||||||||||||| || ||||| |||||||||||||||||||||| Sbjct 211 AGCCCGTTCCCTTGGCTGTGGTTTCGCTGGAGAGTAGGTAGGGACAGTGGGAATCTCGTT 152 Query 387 AATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCA 446 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 151 CATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCA 92 Query 447 TAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCA 506 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 91 TAGTTACTCCCGCCGTTTACCCGCGCTTCATTGAATTTCTTCACTTTGACATTCAGAGCA 32 Query 507 CTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||| | ||||||| Sbjct 31 CTGGGCAGAAATCACATCGTGTCAACA 5 >seq174056 Length=5254 Score = 134 bits (148), Expect = 4e-29 Identities = 115/142 (81%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 378 AATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTA 437 |||||| || |||||||| || ||| || |||||||||| | | |||||||||||||| Sbjct 4672 AATCTCATTTGTCCATTCACGCAGGTCCCTGATTAGATGACAAAGTATTTGGCTACCTTA 4613 Query 438 AGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACA 497 | ||| | ||||||||||| || |||| | | | | ||||||||||||||||||||| Sbjct 4612 ACAGAATTGTAGTTACTCCCACCATTTATTCACACATCATTGAATTTCTTCACTTTGACA 4553 Query 498 TTCAGAGCACTGGGCAGAAATC 519 ||||| |||||||| |||| || Sbjct 4552 TTCAGGGCACTGGGTAGAAGTC 4531 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1619305888704