Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lyrurus_20tetrix_20tetrix_20[genbank_20GCA_5F000586395.1_202014-03-
08] 971,998 sequences; 657,025,294 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq971084 295 2e-77
seq99720 156 1e-35
seq519700 114 4e-23
>seq971084
Length=401
Score = 295 bits (326), Expect = 2e-77
Identities = 218/253 (86%), Gaps = 1/253 (0%)
Strand=Plus/Minus
Query 3 ACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61
|||||||||||||||| | || | |||||| ||||||| ||||| | |||||||||||
Sbjct 253 ACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACTACCTC 194
Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121
|||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 193 CCCGGGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 134
Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAG 181
||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||
Sbjct 133 CTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTGGTCACCATGGTAG 74
Query 182 GCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC 241
|| | ||||||||||||||||||||||||| ||| ||||| | |||||| | |
Sbjct 73 GCACAGACAGTACCATCGAAAGTTGATAGGGCAGACATTCGAATGGGTCGTCGCCGCCAC 14
Query 242 AAGGCCATGCGAT 254
|| | ||||||
Sbjct 13 GGGGGCGTGCGAT 1
>seq99720
Length=229
Score = 156 bits (172), Expect = 1e-35
Identities = 137/170 (81%), Gaps = 2/170 (1%)
Strand=Plus/Plus
Query 112 GTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGAT 171
||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
Sbjct 1 GTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTGGTC 60
Query 172 ACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCA 231
|||||||||||| | ||||||||||||||||||||||||| ||| ||||| |
Sbjct 61 ACCATGGTAGGCACAGACAGTACCATCGAAAGTTGATAGGGCAGACATTCGAATGGGTCG 120
Query 232 TCGCCGGCTCAAGGCCATGCGATTCGTT--AAGTTATTATGAATCACCAA 279
|||||| | | || | |||||| | | | ||||| || |||||||
Sbjct 121 TCGCCGCCACGGGGGCGTGCGATCGGCTCGAGGTTATCTAGAGTCACCAA 170
>seq519700
Length=237
Score = 114 bits (126), Expect = 4e-23
Identities = 86/100 (86%), Gaps = 1/100 (1%)
Strand=Plus/Plus
Query 405 ATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATG 464
|||||||||||||||||||||| ||||||| |||||| | | ||||||||||||
Sbjct 30 ATAACTGATTTAATGAGCCATTTGCAGTTTTACTGTACTGCCCCTGTGTACTTAGACATG 89
Query 465 CATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
|||||||||| |||||||||||||||| | ||||||||||
Sbjct 90 CATGGCTTAACCTTTGAGACAAGCATACG-CTACTGGCAG 128
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1495718942208
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |