Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lyrurus_20tetrix_20tetrix_20[genbank_20GCA_5F000586395.1_202014-03- 08] 971,998 sequences; 657,025,294 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq971084 295 2e-77 seq99720 156 1e-35 seq519700 114 4e-23 >seq971084 Length=401 Score = 295 bits (326), Expect = 2e-77 Identities = 218/253 (86%), Gaps = 1/253 (0%) Strand=Plus/Minus Query 3 ACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61 |||||||||||||||| | || | |||||| ||||||| ||||| | ||||||||||| Sbjct 253 ACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACTACCTC 194 Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121 |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 193 CCCGGGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 134 Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAG 181 ||||||||||||||||||||||||||||| |||||||||||||||| | |||||||||| Sbjct 133 CTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTGGTCACCATGGTAG 74 Query 182 GCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC 241 || | ||||||||||||||||||||||||| ||| ||||| | |||||| | | Sbjct 73 GCACAGACAGTACCATCGAAAGTTGATAGGGCAGACATTCGAATGGGTCGTCGCCGCCAC 14 Query 242 AAGGCCATGCGAT 254 || | |||||| Sbjct 13 GGGGGCGTGCGAT 1 >seq99720 Length=229 Score = 156 bits (172), Expect = 1e-35 Identities = 137/170 (81%), Gaps = 2/170 (1%) Strand=Plus/Plus Query 112 GTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGAT 171 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | Sbjct 1 GTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTGGTC 60 Query 172 ACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCA 231 |||||||||||| | ||||||||||||||||||||||||| ||| ||||| | Sbjct 61 ACCATGGTAGGCACAGACAGTACCATCGAAAGTTGATAGGGCAGACATTCGAATGGGTCG 120 Query 232 TCGCCGGCTCAAGGCCATGCGATTCGTT--AAGTTATTATGAATCACCAA 279 |||||| | | || | |||||| | | | ||||| || ||||||| Sbjct 121 TCGCCGCCACGGGGGCGTGCGATCGGCTCGAGGTTATCTAGAGTCACCAA 170 >seq519700 Length=237 Score = 114 bits (126), Expect = 4e-23 Identities = 86/100 (86%), Gaps = 1/100 (1%) Strand=Plus/Plus Query 405 ATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATG 464 |||||||||||||||||||||| ||||||| |||||| | | |||||||||||| Sbjct 30 ATAACTGATTTAATGAGCCATTTGCAGTTTTACTGTACTGCCCCTGTGTACTTAGACATG 89 Query 465 CATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||| |||||||||||||||| | |||||||||| Sbjct 90 CATGGCTTAACCTTTGAGACAAGCATACG-CTACTGGCAG 128 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1495718942208