Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lyrurus_20tetrix_20tetrix_20[genbank_20GCA_5F000586395.1_202014-03- 08] 971,998 sequences; 657,025,294 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq624761 100 2e-16 seq456224 91.5 1e-13 >seq624761 Length=539 Score = 100 bits (110), Expect = 2e-16 Identities = 91/115 (79%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 61256 TGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGA 61315 |||| || ||| || || |||||| | | || || ||||||||||| |||||||||| Sbjct 249 TGGAGCGGTTCAGTCAAGAAGTGCAAATCACAGAAGCACGTTGTTTCTATGGCTTCCAGA 308 Query 61316 TTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACAT 61370 |||||||||| ||| | || || || ||||||||| |||| || || |||||||| Sbjct 309 TTGCCATGGAAAATATACATTCAGAAATGTACAGTCTTCTTATTGACACGTACAT 363 >seq456224 Length=2743 Score = 91.5 bits (100), Expect = 1e-13 Identities = 82/103 (80%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 61270 CAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAAT 61329 ||||||||||| | | || || ||||||||||| ||||||||||| ||| ||||| Sbjct 1433 CAGGAGGTGCAGATCCCAGAAGCTCGTTGTTTCTATGGCTTCCAGATCCTCATTGAGAAC 1374 Query 61330 GTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCA 61372 || ||||||||||||||||| | || || || || ||||||| Sbjct 1373 GTTCACTCGGAGATGTACAGCTTGCTTATAGACACTTACATCA 1331 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 392858319770720