Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manacus_20vitellinus_20[refseq_20GCF_5F001715985.1_202016-08-29] 15,315 sequences; 1,213,420,527 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq106 77.0 8e-12 >seq106 Length=18380257 Score = 77.0 bits (84), Expect = 8e-12 Identities = 101/139 (73%), Gaps = 1/139 (1%) Strand=Plus/Minus Query 11 CTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCG 70 |||| | ||||||| || ||||||||||||| | || | ||||||||| | | ||| Sbjct 14723347 CTGCTTTTTCACAGGGAGATCAATTTCACTGATTATCTGTAGGAGACAGCTAAGACCTCG 14723288 Query 71 TTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 130 ||| ||||||| | || ||| | ||| ||||| ||| ||||||||| | || || Sbjct 14723287 TTAAGCCATTCATACAAGTCCCGATTTATGGGACAATTGATTGCGCTACCTTTGCACGGT 14723228 Query 131 TATTGTTACGGCCGCCGTT 149 || | ||| || |||||| Sbjct 14723227 TA-GGATACAGCGGCCGTT 14723210 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260606908480