Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manacus_20vitellinus_20[refseq_20GCF_5F001715985.1_202016-08-29] 15,315 sequences; 1,213,420,527 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq14400 197 3e-48 seq12416 197 3e-48 seq11351 197 3e-48 seq4673 197 3e-48 seq1102 197 3e-48 seq13752 194 3e-47 seq12967 194 3e-47 seq2357 194 3e-47 seq2191 194 3e-47 seq643 176 9e-42 seq590 91.5 3e-16 >seq14400 Length=6373 Score = 197 bits (218), Expect = 3e-48 Identities = 201/258 (78%), Gaps = 3/258 (1%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | |||| || | ||||| |||||||||||||||| Sbjct 5876 CTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGA-GATTGAG-CAATAACAGGTCTGTG 5933 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| | |||||||||||||||||||||||| | || | || | | Sbjct 5934 ATGCCCTTAGATGTCCGGGGCCGCACGCGCGCTACACTGACTGGCTCAGCTTGTGCCTAC 5993 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 ||| ||||| ||| |||||| | | || | | ||||| ||||||| | | |||| Sbjct 5994 CCTCCGCCGGCAGGCGCGGGTAACCCGTTGAACCCCATTCGTGATGGGGATCGGGGATTG 6053 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 ||||| || | | | |||||||||| || |||||| ||| ||||| ||| |||||||||| Sbjct 6054 CAATTCTTCCCCGTGAACGAGGAATTCCCAGTAAGTGCGGGTCATAAGCTCGCGTTGATT 6113 Query 311 ACGTCCCTGCCCTTTGTA 328 | |||||||||||||||| Sbjct 6114 AAGTCCCTGCCCTTTGTA 6131 >seq12416 Length=6463 Score = 197 bits (218), Expect = 3e-48 Identities = 201/258 (78%), Gaps = 3/258 (1%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | |||| || | ||||| |||||||||||||||| Sbjct 5968 CTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGA-GATTGAG-CAATAACAGGTCTGTG 6025 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| | |||||||||||||||||||||||| | || | || | | Sbjct 6026 ATGCCCTTAGATGTCCGGGGCCGCACGCGCGCTACACTGACTGGCTCAGCTTGTGCCTAC 6085 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 ||| ||||| ||| |||||| | | || | | ||||| ||||||| | | |||| Sbjct 6086 CCTCCGCCGGCAGGCGCGGGTAACCCGTTGAACCCCATTCGTGATGGGGATCGGGGATTG 6145 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 ||||| || | | | |||||||||| || |||||| ||| ||||| ||| |||||||||| Sbjct 6146 CAATTCTTCCCCGTGAACGAGGAATTCCCAGTAAGTGCGGGTCATAAGCTCGCGTTGATT 6205 Query 311 ACGTCCCTGCCCTTTGTA 328 | |||||||||||||||| Sbjct 6206 AAGTCCCTGCCCTTTGTA 6223 >seq11351 Length=3780 Score = 197 bits (218), Expect = 3e-48 Identities = 201/258 (78%), Gaps = 3/258 (1%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | |||| || | ||||| |||||||||||||||| Sbjct 498 CTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGA-GATTGAG-CAATAACAGGTCTGTG 441 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| | |||||||||||||||||||||||| | || | || | | Sbjct 440 ATGCCCTTAGATGTCCGGGGCCGCACGCGCGCTACACTGACTGGCTCAGCTTGTGCCTAC 381 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 ||| ||||| ||| |||||| | | || | | ||||| ||||||| | | |||| Sbjct 380 CCTCCGCCGGCAGGCGCGGGTAACCCGTTGAACCCCATTCGTGATGGGGATCGGGGATTG 321 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 ||||| || | | | |||||||||| || |||||| ||| ||||| ||| |||||||||| Sbjct 320 CAATTCTTCCCCGTGAACGAGGAATTCCCAGTAAGTGCGGGTCATAAGCTCGCGTTGATT 261 Query 311 ACGTCCCTGCCCTTTGTA 328 | |||||||||||||||| Sbjct 260 AAGTCCCTGCCCTTTGTA 243 >seq4673 Length=8328 Score = 197 bits (218), Expect = 3e-48 Identities = 201/258 (78%), Gaps = 3/258 (1%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | |||| || | ||||| |||||||||||||||| Sbjct 7831 CTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGA-GATTGAG-CAATAACAGGTCTGTG 7888 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| | |||||||||||||||||||||||| | || | || | | Sbjct 7889 ATGCCCTTAGATGTCCGGGGCCGCACGCGCGCTACACTGACTGGCTCAGCTTGTGCCTAC 7948 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 ||| ||||| ||| |||||| | | || | | ||||| ||||||| | | |||| Sbjct 7949 CCTCCGCCGGCAGGCGCGGGTAACCCGTTGAACCCCATTCGTGATGGGGATCGGGGATTG 8008 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 ||||| || | | | |||||||||| || |||||| ||| ||||| ||| |||||||||| Sbjct 8009 CAATTCTTCCCCGTGAACGAGGAATTCCCAGTAAGTGCGGGTCATAAGCTCGCGTTGATT 8068 Query 311 ACGTCCCTGCCCTTTGTA 328 | |||||||||||||||| Sbjct 8069 AAGTCCCTGCCCTTTGTA 8086 >seq1102 Length=1877 Score = 197 bits (218), Expect = 3e-48 Identities = 201/258 (78%), Gaps = 3/258 (1%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | |||| || | ||||| |||||||||||||||| Sbjct 1380 CTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGA-GATTGAG-CAATAACAGGTCTGTG 1437 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| | |||||||||||||||||||||||| | || | || | | Sbjct 1438 ATGCCCTTAGATGTCCGGGGCCGCACGCGCGCTACACTGACTGGCTCAGCTTGTGCCTAC 1497 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 ||| ||||| ||| |||||| | | || | | ||||| ||||||| | | |||| Sbjct 1498 CCTCCGCCGGCAGGCGCGGGTAACCCGTTGAACCCCATTCGTGATGGGGATCGGGGATTG 1557 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 ||||| || | | | |||||||||| || |||||| ||| ||||| ||| |||||||||| Sbjct 1558 CAATTCTTCCCCGTGAACGAGGAATTCCCAGTAAGTGCGGGTCATAAGCTCGCGTTGATT 1617 Query 311 ACGTCCCTGCCCTTTGTA 328 | |||||||||||||||| Sbjct 1618 AAGTCCCTGCCCTTTGTA 1635 >seq13752 Length=6598 Score = 194 bits (214), Expect = 3e-47 Identities = 200/258 (78%), Gaps = 3/258 (1%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | |||| || | ||||| |||||||||||||||| Sbjct 6101 CTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGA-GATTGAG-CAATAACAGGTCTGTG 6158 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| | |||||||||||||||||||||||| | || | || | | Sbjct 6159 ATGCCCTTAGATGTCCGGGGCCGCACGCGCGCTACACTGACTGGCTCAGCTTGTGCCTAC 6218 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 ||| ||||| ||| ||| || | | || | | ||||| ||||||| | | |||| Sbjct 6219 CCTCCGCCGGCAGGCGCGGGGAACCCGTTGAACCCCATTCGTGATGGGGATCGGGGATTG 6278 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 ||||| || | | | |||||||||| || |||||| ||| ||||| ||| |||||||||| Sbjct 6279 CAATTCTTCCCCGTGAACGAGGAATTCCCAGTAAGTGCGGGTCATAAGCTCGCGTTGATT 6338 Query 311 ACGTCCCTGCCCTTTGTA 328 | |||||||||||||||| Sbjct 6339 AAGTCCCTGCCCTTTGTA 6356 >seq12967 Length=2487 Score = 194 bits (214), Expect = 3e-47 Identities = 200/258 (78%), Gaps = 3/258 (1%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | |||| || | ||||| |||||||||||||||| Sbjct 1994 CTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGA-GATTGAG-CAATAACAGGTCTGTG 2051 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| | |||||||||||||||||||||||| | || | || | | Sbjct 2052 ATGCCCTTAGATGTCCGGGGCCGCACGCGCGCTACACTGACTGGCTCAGCTTGTGCCTAC 2111 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 ||| ||||| ||| |||||| | | | | | ||||| ||||||| | | |||| Sbjct 2112 CCTCCGCCGGCAGGCGCGGGTAACCCGTTGACCCCCATTCGTGATGGGGATCGGGGATTG 2171 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 ||||| || | | | |||||||||| || |||||| ||| ||||| ||| |||||||||| Sbjct 2172 CAATTCTTCCCCGTGAACGAGGAATTCCCAGTAAGTGCGGGTCATAAGCTCGCGTTGATT 2231 Query 311 ACGTCCCTGCCCTTTGTA 328 | |||||||||||||||| Sbjct 2232 AAGTCCCTGCCCTTTGTA 2249 >seq2357 Length=14206 Score = 194 bits (214), Expect = 3e-47 Identities = 200/258 (78%), Gaps = 3/258 (1%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | |||| || | ||||| |||||||||||||||| Sbjct 13709 CTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGA-GATTGAG-CAATAACAGGTCTGTG 13766 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| | |||||||||||||||||||||||| | || | || | | Sbjct 13767 ATGCCCTTAGATGTCCGGGGCCGCACGCGCGCTACACTGACTGGCTCAGCTTGTGCCTAC 13826 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 ||| ||||| ||| ||| || | | || | | ||||| ||||||| | | |||| Sbjct 13827 CCTCCGCCGGCAGGCGCGGGGAACCCGTTGAACCCCATTCGTGATGGGGATCGGGGATTG 13886 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 ||||| || | | | |||||||||| || |||||| ||| ||||| ||| |||||||||| Sbjct 13887 CAATTCTTCCCCGTGAACGAGGAATTCCCAGTAAGTGCGGGTCATAAGCTCGCGTTGATT 13946 Query 311 ACGTCCCTGCCCTTTGTA 328 | |||||||||||||||| Sbjct 13947 AAGTCCCTGCCCTTTGTA 13964 >seq2191 Length=7689 Score = 194 bits (214), Expect = 3e-47 Identities = 200/258 (78%), Gaps = 3/258 (1%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | |||| || | ||||| |||||||||||||||| Sbjct 498 CTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGA-GATTGAG-CAATAACAGGTCTGTG 441 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| | |||||||||||||||||||||||| | || | || | | Sbjct 440 ATGCCCTTAGATGTCCGGGGCCGCACGCGCGCTACACTGACTGGCTCAGCTTGTGCCTAC 381 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 ||| ||||| ||| |||||| | | | | | ||||| ||||||| | | |||| Sbjct 380 CCTCCGCCGGCAGGCGCGGGTAACCCGTTGACCCCCATTCGTGATGGGGATCGGGGATTG 321 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 ||||| || | | | |||||||||| || |||||| ||| ||||| ||| |||||||||| Sbjct 320 CAATTCTTCCCCGTGAACGAGGAATTCCCAGTAAGTGCGGGTCATAAGCTCGCGTTGATT 261 Query 311 ACGTCCCTGCCCTTTGTA 328 | |||||||||||||||| Sbjct 260 AAGTCCCTGCCCTTTGTA 243 >seq643 Length=9611585 Score = 176 bits (194), Expect = 9e-42 Identities = 196/258 (76%), Gaps = 3/258 (1%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | |||| || | ||||| |||||||||||||||| Sbjct 92193 CTTCTTAGAGGGACAAGTGGCATTCAGCCACCCGA-GATTGAG-CAATAACAGGTCTGTG 92250 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| ||||||||||||| |||||||||| || || | || | | Sbjct 92251 ATGCCCTTAGATGTCTGGGGCCGCACGCGCACTACACTGACTGACTCAGCTTGTGCCTAC 92310 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 ||| ||||| ||| ||||| | | || | | ||||| ||||||| | | |||| Sbjct 92311 CCTCCGCCGGCAGGCGCAGGTAACCCGTTGAACCCCATTCGTGATGGGGATCGGGGATTG 92370 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 ||||| || | | | || ||||||| || |||||| || ||||| ||| | |||||||| Sbjct 92371 CAATTCTTCCCCGTGAATGAGGAATTCCCAGTAAGTGCAGGTCATAAGCTCACGTTGATT 92430 Query 311 ACGTCCCTGCCCTTTGTA 328 | |||||||||||||||| Sbjct 92431 AAGTCCCTGCCCTTTGTA 92448 >seq590 Length=10173121 Score = 91.5 bits (100), Expect = 3e-16 Identities = 125/175 (71%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 154 CACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAA 213 |||||| |||||||||| | || | || | | |||| |||| ||| |||||| Sbjct 4439845 CACGCGTGCTACACTGAGTGGCTCAGCTTGTGCCTACCCTTCACCGGCAGGCACGGGTAA 4439904 Query 214 TCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGA 273 | || | | ||| | ||||||| | | ||||||||| || | | | |||||||| Sbjct 4439905 CCCGTGGAACCCCATTCGCGATGGGGATCGGGGATTGCAATTCTTCCCCGTGAACGAGGA 4439964 Query 274 ATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 || || |||||| || ||||| ||| | |||||||| ||| |||||||||||| Sbjct 4439965 ATTCCCAGTAAGTGCAGGTCATAAGCTCAGGTTGATTAAGTCTCTGCCCTTTGTA 4440019 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947054936320