Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manacus_20vitellinus_20[refseq_20GCF_5F001715985.1_202016-08-29] 15,315 sequences; 1,213,420,527 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq60 104 1e-16 >seq60 Length=462288 Score = 104 bits (114), Expect = 1e-16 Identities = 102/132 (77%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 349084 CTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGCAAAGTGGAA 349143 ||||||||| | ||||| ||||||||| ||||||||||||| ||||| || ||||||| Sbjct 461084 CTCCTTGAGGCGGGGCACGCCCAGGGTGACGTTCTTGGCCGACACGCCCGCGTAGTGGAA 461025 Query 349144 GGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGAGGATGCCTAC 349203 ||| | ||||||| ||||||| || || || | |||| | || ||| ||| || Sbjct 461024 GGTGTTCAGGGTCATCTGCGTGGCCGGTTCCCCCAGAGACTGCGCGGCCAGGGCGCCCAC 460965 Query 349204 CATCTCGCCGGG 349215 |||||| ||||| Sbjct 460964 CATCTCCCCGGG 460953 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084320147876370