Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq1 116 3e-21 seq2002 104 2e-17 seq2976 91.5 1e-13 >seq1 Length=190651702 Score = 116 bits (128), Expect = 3e-21 Identities = 125/162 (77%), Gaps = 4/162 (2%) Strand=Plus/Plus Query 66049 GGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTG 66108 ||||||||| || || || ||||||||||| ||||| ||||| ||||| ||||| || Sbjct 189193126 GGTATACTCCACTATCTCTGTGCACAGATTGCTGCATTTGATGGTCCCCAAGTTCTGCTG 189193185 Query 66109 ATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTG 66168 ||| || || | ||||| | || ||||||| |||||| || ||||| ||||| || Sbjct 189193186 ATTGCTTTTCCTGTTGCAGGAGTCTTTGTACAGCATGTAAGGCGTGCCAGTCTCTGTCTG 189193245 Query 66169 GGACTCAATGATGGCGTGCCAAAGAGC-GC-GTGCCTTCACC 66208 ||||| |||||||||| || ||||| || | ||||||||| Sbjct 189193246 TGACTCGATGATGGCGTACC--AGAGCTGCTGGGCCTTCACC 189193285 >seq2002 Length=109662234 Score = 104 bits (114), Expect = 2e-17 Identities = 92/115 (80%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 61256 TGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGA 61315 |||| || ||| || || |||||| | | || || ||||||||||| |||||||||| Sbjct 93264645 TGGAGCGGTTCAGTCAAGAAGTGCAAATCACAGAAGCTCGTTGTTTCTATGGCTTCCAGA 93264704 Query 61316 TTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACAT 61370 |||||||||| ||| | || || || ||||||||| ||||||| || |||||||| Sbjct 93264705 TTGCCATGGAAAATATACATTCAGAAATGTACAGTCTTCTCATTGACACGTACAT 93264759 >seq2976 Length=93210757 Score = 91.5 bits (100), Expect = 1e-13 Identities = 82/103 (80%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 61270 CAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAAT 61329 ||||||||||| | | || || ||||||||||| |||||||||||| ||| ||||| Sbjct 73921987 CAGGAGGTGCAGATCCCAGAAGCTCGTTGTTTCTATGGCTTCCAGATTCTCATTGAGAAC 73921928 Query 61330 GTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCA 61372 || ||||| ||||||||||| | || || || || ||||||| Sbjct 73921927 GTTCACTCAGAGATGTACAGCTTGCTTATAGACACTTACATCA 73921885 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396447336067040