Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_031918.1 Length=45342 Score E Sequences producing significant alignments: (Bits) Value seq27876 156 1e-33 >seq27876 Length=5349 Score = 156 bits (172), Expect = 1e-33 Identities = 235/334 (70%), Gaps = 0/334 (0%) Strand=Plus/Minus Query 28924 CAAAAACATCACCTAATACCGGCCTGAAGGCACAGACAAACATTGCGCGCAATGGAGAGG 28983 |||| || || || || | | ||||||| | || || ||||||||||| || || |||| Sbjct 4836 CAAAGACCTCCCCGAACAACAGCCTGAAAGGGCAAACCAACATTGCGCGAAACGGTGAGG 4777 Query 28984 CGCGACCTGATAACTTCGGGCAGATTCGCGCGTTTCCTGATTTGCTTCAGGAATCATTAT 29043 | ||||| |||| ||| ||| | ||||||| ||||| || ||||||| || | | Sbjct 4776 CAAAGCCTGACAACTACGGCCAGGTGCGCGCGTACCCTGACCTGATTCAGGAGTCGCTGT 4717 Query 29044 TTGAATATATCAATAACATTAAATACGTCACCGAGTTCATGAACTTTGGTCTCGGTAAGT 29103 | || || ||| ||||| || | ||||| |||| |||||||| || ||||| || Sbjct 4716 TCGAGTACGACAACAACATCAAGAAAGTCACAGAGTGGATGAACTTCGGGCTCGGCCGGT 4657 Query 29104 ATGACGTATCATCCGTGCGTTATTCTGAGTCAAACCTCGGCTCACTGGCTGGCGCGAGTT 29163 ||||||| | || || | || || || || ||||| || | ||||||||||| | Sbjct 4656 ATGACGTCACGTCAGTAAGGTACTCAGAATCGAACCTGGGAGCGCTGGCTGGCGCTTCAT 4597 Query 29164 ACACCATCTATCAGCCGGGAGAGGTTATTCCGGTTGTGTATGAACCTTACGCATTTGATG 29223 || |||||| ||||| || ||| ||||||| | | |||| | ||| || || | Sbjct 4596 ACCGCATCTACCAGCCAGGCGAGAATATTCCGCTGATCAATGAGGGGTTCGCTTTCGACG 4537 Query 29224 ATGTTGATGGACAGGAGCTTTACGGACCAAACGA 29257 | | || |||||||||||| || || ||||| Sbjct 4536 ACATCGACGGACAGGAGCTTCCTGGGCCGAACGA 4503 Score = 95.1 bits (104), Expect = 3e-15 Identities = 356/554 (64%), Gaps = 6/554 (1%) Strand=Plus/Minus Query 30223 TGCCTGATGAGCGACTTGGTTGTTTCGACTATACATTCGATGATGAAGATAAAAGTATTG 30282 |||| ||| |||| | || | |||||| || ||||||||||||||||||| | | Sbjct 3546 TGCCGGATCAGCGCATGGGGTATTTCGATTACACATTCGATGATGAAGATATCTCGCTGG 3487 Query 30283 GCGAACGCCTGCAAACAATCTGCGACGCAGCACGAGTCACCGCATTCTGGGATGATGGCG 30342 || || | || || ||||| || || || || || || |||||||||| || | Sbjct 3486 GCTCTCGGATTCAGACGATCTGTGATGCGGCCACCGTGACGGCGTTCTGGGATGGCGGGG 3427 Query 30343 TGATGAGCTTTTCGCGTGATGA--GAAACGAGAATATCCAGCAACAGTATTTAACACCAG 30400 || || || |||||||||| |||| || || | | || ||||| ||| | Sbjct 3426 TGTTGTCTTTCACGCGTGATGAACGAAAACCGA--ATGCGACGACGGTATTCAACCGCGC 3369 Query 30401 AAACACGCAGAGCGACGGA-TACAAGTTAAGTTACGACATCAGCCTTCCAGGGACTTATG 30459 |||| | | |||| ||| |||| | |||||||| | || ||||| || || Sbjct 3368 CAACATG-AAAGCGGAGGATTACAGCCTTTCCTACGACATGACTCTACCAGGTGGTTTTG 3310 Query 30460 ACGGGGTTAACGTCGAATACCGCGACCCAACAACGAATAAGCAAGCCAACGTTTACTACC 30519 | ||||| | ||| | || || |||| |||||||| || || | | ||||| Sbjct 3309 ATGGGGTAGAGGTCAAGTATCGAAACCCGGTCACGAATAAACAGGCATTCATCCGCTACC 3250 Query 30520 GAATTACCGATAGCGGAATAGTCGAAGGCGAACCAACGAAAGCCAAGAAATTCGACATGC 30579 | || || | | || | || || ||||| || || |||||||| ||||||| Sbjct 3249 GGATCGTCGGCAACACGATTGAAGAGGGGGAACCGGTAAAGGCGAAGAAATTTGACATGC 3190 Query 30580 TTTATGTTCGCAATCGATATCAGGCTGTTGACAGGGCAATCCTTGAGTGTCGCCGCCTGA 30639 | | | | |||||| || || || || ||||| | || |||||| ||| Sbjct 3189 TGTTTATCCGCAATTCGTACCAAGCGCGGGATCGGGCATTGAAAGAAGTTCGCCGGCTGC 3130 Query 30640 TTTACTCCCGTCGTAGCATGGAGATTAAGGCTCTTTCGGATGGGGAATATGTGAACGTTG 30699 | || || || | | ||||| ||| || || | ||||| |||| |||||||| | Sbjct 3129 TGTATTCGCGCCAAACCATGGCCATTCGTGCGCTGGCCGATGGCGAATGGGTGAACGTCG 3070 Query 30700 GTGACATGATTCAGGTTGTCGATATGTATGATGATGTGCAACAGACTGGCGTTATTGAAG 30759 | | ||| | ||||| | ||||| || || | || ||| ||| ||| | | Sbjct 3069 GGCAGATGGTGCAGGTGGCTGATATCTACGACGCGAACCAGCAGGATGGATATATCGTTG 3010 Query 30760 CGCGCAACGGAAAC 30773 |||| ||||| ||| Sbjct 3009 CGCGTAACGGCAAC 2996 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144574629124128