Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_031927.1 Length=216121 Score E Sequences producing significant alignments: (Bits) Value seq30879 156 6e-33 >seq30879 Length=12587 Score = 156 bits (172), Expect = 6e-33 Identities = 505/781 (65%), Gaps = 35/781 (4%) Strand=Plus/Minus Query 162096 AATGAAAGTAGCACTTATTACTGGGATCACAGGGCAAGATGGATCTTACCTAGCTGAACT 162155 || |||| | ||| | |||||||| | || ||||||||||| | || || || ||| | Sbjct 11686 AAAGAAAATTGCATTGATTACTGGCGTTACTGGGCAAGATGGCGCATATCTGGCCGAATT 11627 Query 162156 TCTCCTTCAGAAAGGATATACAGTTCACGGTATTATCCGTCGTGCTTCTATGATTAACAC 162215 ||| ||||||||| || ||| || || | || || |||||| || | || || Sbjct 11626 TCTACTTCAGAAAAATTACGAAGTCCATGGCGTGCGTCGACGCGCTTCTTTGTTCAATAC 11567 Query 162216 CCACAGAATTGACCATAT------------------------CTTTGACCGCATCACTCT 162251 || | ||||||||| | || ||||| | || | Sbjct 11566 AGACCGTATTGACCATCTGTACCACGATCCACATAACAAGGGCTATGACC---TGACCTT 11510 Query 162252 CCATTATGGAGACCTTACCGATGCTTTGAGTATCGTATCTATTATTAAAACAGTTCAACC 162311 ||||||||||| | || ||| ||| || || | | | | | ||| | || Sbjct 11509 GCATTATGGAGATTTGACGGATTCTTCCAGCCTCATTCGTGTGGTGCAGGAAGTCAAGCC 11450 Query 162312 AGATGAAATATATAACCTAGGGGCTCAGAGTCACGTTAAGGTTTCATTTGATCAGCCTGA 162371 |||||| | ||||| || | ||||| |||||||| |||||| ||||| |||| || Sbjct 11449 CGATGAAGTCTATAATCTTGCTGCTCAAAGTCACGTGGCGGTTTCTTTTGAAGAGCCGGA 11390 Query 162372 ATACACAGCACAGACCGACGCATTGGGCACTCTAAGGGTGCTAGAAGCCGTCCGTCTTCT 162431 ||| || || | | || ||||| || || || | | || ||||| | ||| || Sbjct 11389 ATATACGGCCAATTCGGATGCATTAGGTACACTTCGAATTCTGGAAGCAATTCGTATTGC 11330 Query 162432 TGGTATGGAATCATACGTAAGAATCT-ACCAAGCGAGCACCAGTGAGCTTTATGGGCTAG 162490 ||| || || |||| | ||| | | || || || ||||| || || || | Sbjct 11329 GGGTTTGAAAG-ATACAACAAAATTTTATCAGGCATCGACATCCGAGCTCTACGGCCTGG 11271 Query 162491 TTCAGGAGACACCCCAGAAAGAAACCACTCCAATGTATCCACGATCCCCTTATGGAGTTG 162550 |||| || | ||| || |||||||| || || | || || || || || |||| || | Sbjct 11270 TTCAAGAAATACCTCAAAAAGAAACAACGCCTTTCTACCCGCGTTCACCCTATGCCGTGG 11211 Query 162551 CTAAACTATATGGGTTCTGGATCATCAAAAACTACAGGGAAAGCTATGACATACATGCCT 162610 |||| | |||| | |||||||| |||||||||||| ||||| ||| | || | Sbjct 11210 CTAAGATGTATGCTTACTGGATCACGGTCAACTACAGGGAAGCCTATGGCATGTACGCGT 11151 Query 162611 CTAGCGGTATTCTATTCAATCACGAAAGCTCACG--CAGAGGAGAGACGTTCGTCACACG 162668 | ||| ||||| |||||||| | | ||| || | || || || ||||| || || Sbjct 11150 GCAACGGAATTCTTTTCAATCATG-AGTCTC-CGATTCGCGGTGAAACATTCGTGACTCG 11093 Query 162669 CAAGATCGTCCGAGCCTTGTCCCGAATTAGTGTGGGACTCCAA-AGTGATCTACAACTTG 162727 ||||| || || || | || || | | ||||| ||| | || || | |||| Sbjct 11092 AAAGATTACGCGTGCTCTGGCGCGTATCAAGCTTGGACTGCAAGAATG-CCTTTATCTTG 11034 Query 162728 GAAACCTCAATGCCCGACGTGACTGGGGACACGCCAAAGACTACGTAGAGGCTATGTGGT 162787 |||| | ||||| | || |||||||| ||||| ||||| || ||| |||| Sbjct 11033 GAAATATGAATGCGCTTCGCGACTGGGGTCACGCGCGTGACTATGTTGAGATGCAGTGGC 10974 Query 162788 TGATGCTTCAGCAAGAGAAGCCAGATGATTATGTGATCGCAACTGGTGAGCAGTATTCTG 162847 ||||||| ||||| || ||| | || || | |||||| || || ||||| ||| | || | Sbjct 10973 TGATGCTACAGCAGGACAAGGCGGAAGACTTTGTGATTGCTACGGGTGAACAGCACTCGG 10914 Query 162848 T 162848 | Sbjct 10913 T 10913 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 689460139593360