Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Melopsittacus_20undulatus_20[refseq_20GCF_5F000238935.1_202012-01-
02] 25,212 sequences; 1,117,373,619 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq9657 178 2e-42
seq9660 161 1e-37
seq23381 123 4e-26
seq25188 100 4e-19
>seq9657
Length=1201
Score = 178 bits (196), Expect = 2e-42
Identities = 183/234 (78%), Gaps = 4/234 (2%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||| || ||||||||||||| ||||| ||| |||||| |||||| |
Sbjct 1189 GTACAAAGGGCAGGGACTTAATCAACGCGAGCTT-ATGACCCGCACTTACTGGGAATT-C 1132
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119
|||||| | | || ||||||||| | ||||||||||||| ||||| | ||
Sbjct 1131 CTCGTTCACGGGGAAGAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCAACGGGTT 1072
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
||||| |||| |||| ||| | || | ||| |||||||||||||||||||
Sbjct 1071 ACCCGCGCCTGCCGGCGGAGGGTAGGCACAAGCTGAGCCAGTCAGTGTAGCGCGCGTGCG 1012
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233
|||| | |||||||||||||||||||||||||||||| ||||| || |||||
Sbjct 1011 GCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGGGTGGC 959
>seq9660
Length=1139
Score = 161 bits (178), Expect = 1e-37
Identities = 174/225 (77%), Gaps = 4/225 (2%)
Strand=Plus/Plus
Query 10 GCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCTCGTTGAA 69
|||||||| || ||||||||||||| ||||| ||| |||||| |||||| ||||||| |
Sbjct 1 GCAGGGACTTAATCAACGCGAGCTT-ATGACCCGCACTTACTGGGAATT-CCTCGTTCAC 58
Query 70 GACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TTACCCGGACC 128
| || ||||||||| | ||||||||||||| ||||| | ||||||| ||
Sbjct 59 GGGGAAGAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCAACGGGTTACCCGCGCC 118
Query 129 TGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAAC 188
|| |||| ||| | || | ||| ||||||||||||||||||||||| | ||
Sbjct 119 TGCCGGCGGAGGGTAGGCACAAGCTGAGCCAGTCAGTGTAGCGCGCGTGCGGCCCCGGAC 178
Query 189 ATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233
|||||||||||||||||||||||||||| ||||| || |||||
Sbjct 179 ATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGGGTGGC 222
>seq23381
Length=1557
Score = 123 bits (136), Expect = 4e-26
Identities = 143/189 (76%), Gaps = 3/189 (2%)
Strand=Plus/Plus
Query 46 CTTACTAGGAATTTCCTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATG 105
|||||| |||||| ||||||| | | || ||||||||| | |||||||||||||
Sbjct 2 CTTACTGGGAATT-CCTCGTTCACGGGGAAGAATTGCAATCCCCGATCCCCATCACGAAT 60
Query 106 AAATTTCAAAGA-TTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAG 164
||||| | ||||||| |||| |||| ||| | || | ||| ||||
Sbjct 61 GGGGTTCAACGGGTTACCCGCGCCTGCCGGCGGAGGGTAGGCACAAGCTGAGCCAGTCAG 120
Query 165 TGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAAC 224
||||||||||||||||||| | |||||||||||||||||||||||||||||| ||||| |
Sbjct 121 TGTAGCGCGCGTGCGGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATC 179
Query 225 TTCCGTGGC 233
| |||||
Sbjct 180 TCGGGTGGC 188
>seq25188
Length=24126677
Score = 100 bits (110), Expect = 4e-19
Identities = 168/236 (71%), Gaps = 8/236 (3%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|| ||| |||||||||| | |||| | |||||| ||||| ||| | |||| |||||| |
Sbjct 19822953 GTGCAATGGGCAGGGACTAAATCAATGTGAGCTT-ATGACCCGCACCTACTGGGAATT-C 19822896
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119
|| ||| | || |||||| | |||| ||||||| || | |||| | ||
Sbjct 19822895 CTTGTTCACAGGGAAGTATTGCAGTCCCCTATACCCATCATGAATGGAGTTCATTGGGTT 19822836
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTC--GTTGAATACATCAGTGTAGCGCGCGTG 177
||| | |||| ||| ||| ||| | | | ||| |||||||||| | |||
Sbjct 19822835 ACCTGCGCCTGCTGGCGGAGGG--TAGGCCCAAGCTGATCTAGTCAGTGTAGCATGTGTG 19822778
Query 178 CGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233
||||| | ||||||||||||| |||||||||||||||| ||||| ||| |||||
Sbjct 19822777 TGGCCCTGGACATCTAAGGGCAACACAGACCTGTTATTG-CTCAATCTTGGGTGGC 19822723
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751816330580
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |