Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melopsittacus_20undulatus_20[refseq_20GCF_5F000238935.1_202012-01- 02] 25,212 sequences; 1,117,373,619 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq23381 98.7 6e-19 seq21471 98.7 6e-19 seq9677 98.7 6e-19 seq9660 98.7 6e-19 seq9657 98.7 6e-19 seq9651 98.7 6e-19 seq9494 98.7 6e-19 seq5737 98.7 6e-19 seq9543 91.5 8e-17 seq21076 77.0 2e-12 >seq23381 Length=1557 Score = 98.7 bits (108), Expect = 6e-19 Identities = 92/117 (79%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||||||||||| | |||| || || |||| ||| |||| ||||| |||| Sbjct 490 GAACCCAAAGACTTGGGTTTCCCGGGAGCTGCCCGGCGGGTCATGGGAATAACGCCGCCG 549 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| | ||||||||| ||||| ||| ||||||||||||||||||||||||||| Sbjct 550 GATCGCCAGTCGGCATCGTTTATGGTCGGAACTACGACGGTATCTGATCGTCTTCGA 606 >seq21471 Length=1025 Score = 98.7 bits (108), Expect = 6e-19 Identities = 92/117 (79%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||||||||||| | |||| || || |||| ||| |||| ||||| |||| Sbjct 83 GAACCCAAAGACTTGGGTTTCCCGGGAGCTGCCCGGCGGGTCATGGGAATAACGCCGCCG 142 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| | ||||||||| ||||| ||| ||||||||||||||||||||||||||| Sbjct 143 GATCGCCAGTCGGCATCGTTTATGGTCGGAACTACGACGGTATCTGATCGTCTTCGA 199 >seq9677 Length=1004 Score = 98.7 bits (108), Expect = 6e-19 Identities = 92/117 (79%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||||||||||| | |||| || || |||| ||| |||| ||||| |||| Sbjct 58 GAACCCAAAGACTTGGGTTTCCCGGGAGCTGCCCGGCGGGTCATGGGAATAACGCCGCCG 117 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| | ||||||||| ||||| ||| ||||||||||||||||||||||||||| Sbjct 118 GATCGCCAGTCGGCATCGTTTATGGTCGGAACTACGACGGTATCTGATCGTCTTCGA 174 >seq9660 Length=1139 Score = 98.7 bits (108), Expect = 6e-19 Identities = 92/117 (79%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||||||||||| | |||| || || |||| ||| |||| ||||| |||| Sbjct 522 GAACCCAAAGACTTGGGTTTCCCGGGAGCTGCCCGGCGGGTCATGGGAATAACGCCGCCG 581 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| | ||||||||| ||||| ||| ||||||||||||||||||||||||||| Sbjct 582 GATCGCCAGTCGGCATCGTTTATGGTCGGAACTACGACGGTATCTGATCGTCTTCGA 638 >seq9657 Length=1201 Score = 98.7 bits (108), Expect = 6e-19 Identities = 92/117 (79%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||||||||||| | |||| || || |||| ||| |||| ||||| |||| Sbjct 658 GAACCCAAAGACTTGGGTTTCCCGGGAGCTGCCCGGCGGGTCATGGGAATAACGCCGCCG 599 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| | ||||||||| ||||| ||| ||||||||||||||||||||||||||| Sbjct 598 GATCGCCAGTCGGCATCGTTTATGGTCGGAACTACGACGGTATCTGATCGTCTTCGA 542 >seq9651 Length=1018 Score = 98.7 bits (108), Expect = 6e-19 Identities = 92/117 (79%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||||||||||| | |||| || || |||| ||| |||| ||||| |||| Sbjct 325 GAACCCAAAGACTTGGGTTTCCCGGGAGCTGCCCGGCGGGTCATGGGAATAACGCCGCCG 384 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| | ||||||||| ||||| ||| ||||||||||||||||||||||||||| Sbjct 385 GATCGCCAGTCGGCATCGTTTATGGTCGGAACTACGACGGTATCTGATCGTCTTCGA 441 >seq9494 Length=1016 Score = 98.7 bits (108), Expect = 6e-19 Identities = 92/117 (79%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||||||||||| | |||| || || |||| ||| |||| ||||| |||| Sbjct 1015 GAACCCAAAGACTTGGGTTTCCCGGGAGCTGCCCGGCGGGTCATGGGAATAACGCCGCCG 956 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| | ||||||||| ||||| ||| ||||||||||||||||||||||||||| Sbjct 955 GATCGCCAGTCGGCATCGTTTATGGTCGGAACTACGACGGTATCTGATCGTCTTCGA 899 >seq5737 Length=1109 Score = 98.7 bits (108), Expect = 6e-19 Identities = 92/117 (79%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||||||||||| | |||| || || |||| ||| |||| ||||| |||| Sbjct 963 GAACCCAAAGACTTGGGTTTCCCGGGAGCTGCCCGGCGGGTCATGGGAATAACGCCGCCG 904 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| | ||||||||| ||||| ||| ||||||||||||||||||||||||||| Sbjct 903 GATCGCCAGTCGGCATCGTTTATGGTCGGAACTACGACGGTATCTGATCGTCTTCGA 847 >seq9543 Length=1105 Score = 91.5 bits (100), Expect = 8e-17 Identities = 91/117 (78%), Gaps = 1/117 (1%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||||| ||||| | |||| || || |||| ||| |||| ||||| |||| Sbjct 1005 GAACCCAA-GACTTGGGTTTCCCGGGAGCTGCCCGGCGGGTCATGGGAATAACGCCGCCG 947 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| | ||||||||| ||||| ||| ||||||||||||||||||||||||||| Sbjct 946 GATCGCCAGTCGGCATCGTTTATGGTCGGAACTACGACGGTATCTGATCGTCTTCGA 890 >seq21076 Length=1011 Score = 77.0 bits (84), Expect = 2e-12 Identities = 59/70 (84%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 48 GATAACATCGCCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGA 107 |||||| |||| |||| | ||||||||| ||||| ||| ||||||||||||||||| Sbjct 992 GATAACGCCGCCGGATCGCCAGTCGGCATCGTTTATGGTCGGAACTACGACGGTATCTGA 933 Query 108 TCGTCTTCGA 117 |||||||||| Sbjct 932 TCGTCTTCGA 923 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278334196680